Lepisosteus oculatus (spotted gar): 102697317
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Entry
102697317 CDS
T07349
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc00260
Glycine, serine and threonine metabolism
loc00630
Glyoxylate and dicarboxylate metabolism
loc00670
One carbon pool by folate
loc01100
Metabolic pathways
loc01200
Carbon metabolism
loc01230
Biosynthesis of amino acids
loc01240
Biosynthesis of cofactors
Module
loc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102697317 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102697317 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102697317 (shmt1)
Enzymes [BR:
loc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102697317 (shmt1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
102697317
NCBI-ProteinID:
XP_015215820
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Position
LG13:9498745..9508133
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AA seq
384 aa
AA seq
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MAHNNGNHGDQSKDTWDSHNRIMREPLSSNDPEVFEIIKNEKKRQIYGLELIASENFTSR
AVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALEVYSLDAEKWGVNVQPYS
GSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTG
YIDYDRLAENARLFHPKLIIAGVSCYSRNLDYARMRQIADENGAYLLADMAHISGLVAAG
VVPSPFEHCDVVSTTTHKTLRGCRAGLIFYRKGVRSVDPKTGKESLYNLESLINQAVFPG
LQGGPHNHAIAGVAVALKQALTPEFRAYQVQVVANCRAMAATLTDLGYKIVTGVYFSTSL
RCFYPAETCSSEAETLHSHATPQP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaataatgggaaccatggagaccagagcaaagacacctgggattcccacaac
aggataatgcgcgagcctctcagctccaatgacccggaggtgtttgaaattatcaagaat
gaaaagaaaaggcagatctacggcttagagctcatcgcctctgagaacttcaccagcagg
gcagtgctagaggctctagggtcctgcatgaacaacaagtactctgaaggatatcccggg
caaaggtattacggaggcacggagttcgtggatgagctggagaggctgtgtcagaagcga
gccctggaggtgtacagcctagacgctgagaaatggggggtcaatgtccagccatactca
gggtcccctgctaacttcgctgtgtacaccgccctggtggagccccacgggaggatcatg
ggattggacctaccagacggcggtcatctgactcacggattcatgactgataagaagaaa
atctcggccacctccattttctttgagtcgatgccatacaaggtcaacccagataccggt
tacatagactatgatcgacttgcagagaatgcacgcctcttccatcccaaactcatcatt
gcaggtgtcagctgctactctcgcaacctggactatgcccggatgaggcagatagctgat
gagaacggagcttatctgttggctgacatggcgcacatcagcggcctggtggcggctggg
gtcgtgccctcgccctttgagcactgcgatgtggtctcgaccacgactcacaagaccctc
cggggctgcagggccgggcttatcttctacaggaaaggggtccgcagcgttgacccaaag
actgggaaagagagcctctacaacttagaaagtctgatcaaccaggctgtgttcccaggc
ctgcagggaggaccacacaaccacgccattgcaggggttgcggtggctctgaaacaagcg
ctgacccctgagttccgggcctatcaggtgcaggtggtggcaaactgcagagcaatggca
gcgactctcaccgacctgggctataaaattgtgacaggtgtgtatttcagcacatccctc
agatgtttctacccagccgaaacctgttcttcagaagctgagacccttcactcacacgca
acaccacagccatag
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