Lepisosteus oculatus (spotted gar): 102697703
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Entry
102697703 CDS
T07349
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102697703 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
loc01009
]
102697703 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102697703 (tra2a)
Protein phosphatases and associated proteins [BR:
loc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102697703 (tra2a)
Spliceosome [BR:
loc03041
]
Common components
Common spliceosomal components
SR proteins
102697703 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
102697703
NCBI-ProteinID:
XP_015213466
Ensembl:
ENSLOCG00000011615
LinkDB
All DBs
Position
LG11:complement(40499482..40505061)
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AA seq
296 aa
AA seq
DB search
MSDIEDSNFGGRESRSQSKSDRGSPAHVKSESRSASHSPSRASKRSESRSQSRSKSRSRS
RRHSHRHYTRSRSRSHSHRKKSRSRSYSPDYRRKKSQSTSPMSNRRRHTGSRTRFSNDFK
KETYSHSDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGF
AFVYFERIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHVFSFSNGG
SSSGGRRRDSYYDRGYDRYDRYDEYDYRYSRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcgaggacagcaatttcggaggacgagagtcccgctctcagtcgaaatca
gaccgaggcagccccgctcacgtaaagtccgagagcaggtctgcgtcccacagcccctcc
cgagcctccaagcggtccgagtccaggtcgcagtccaggtccaagtccaggtcgcgctcc
aggaggcactcccaccggcactacacgcgctcccgctcccgctcccactcgcaccgcaag
aagtcgcgcagccgctcctactcccccgactaccgccgcaagaagagccagagcacctcg
cccatgtccaaccgccgccggcacacgggcagcaggaccagattcagcaatgacttcaaa
aaagaaacatacagtcatagtgatgccagggccaaccctgacccgaacacctgtctgggg
gtgtttggcctgagcctgtacacgacggagcgggacctgcgcgaggtgttctcccgctac
gggccgctggcaggggtcaacgtggtgtacgaccagaggaccggccgctcgaggggcttc
gccttcgtctacttcgagagaatcgacgacgccaaggaggcgatggagcgtgccaacgga
atggagctggatgggaggcgcatcagagtggactactccatcacaaaacgcccacacacg
cccacccctggcatctacatggggcggcccacccatgtgttctccttcagcaatggtggc
agcagtagcggcgggcgtcgccgggactcttactacgacagaggctacgaccgatacgac
agatacgacgagtacgattacagatacagccggaggcgatccccctccccgtattacagc
cgatacagatcccgctcccggtctcgctcgtacagcccccggcggtactaa
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