Lepisosteus oculatus (spotted gar): 102697857
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Entry
102697857 CDS
T07349
Symbol
npc1l1
Name
(RefSeq) Niemann-Pick C1-like protein 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102697857 (npc1l1)
Transporters [BR:
loc02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
102697857 (npc1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Folate_rec
Motif
Other DBs
NCBI-GeneID:
102697857
NCBI-ProteinID:
XP_015195797
Ensembl:
ENSLOCG00000015181
LinkDB
All DBs
Position
LG1:complement(7750925..7770491)
Genome browser
AA seq
1347 aa
AA seq
DB search
MNTSAFVVVLCVLGLHQVVSNAIHQEGFCTFYEECGRNPSINISLIKPIIPCVYRGPARK
LSSLHYQRLKDVCPMLDNGENNTYACCSINQLKSLEESLTLSKSLLVRCPSCAENFAHIH
CINTCSPNQSLHINITRTVNVTINAEEKEAVVEYQAYLSRKFADDSFNSCKNVRIPSTGG
FAIATMCGRYGATRCNTQRWLDFQGDSSNGLAPLDIDFRLIPAGTTVGQGIVPYNGRAQR
CNESTSLGGEACSCQDCIESCLIDAPPVSSSGAFKIGQLDGVLVLCLVVFIALSLSFLGF
ILVRNLCRGRSKDKGKDKNDNVVRKEVLPSDVRFKDRASLATQHFLGSLFQSWGTLMASH
PIKVIIISLVIVSAFAAGLVKIELTTDPVQLWSAPNSRARKEKDFHDKHFDPFFRTNQLI
LTAPGRPGYTYDSLLFGKQNFSGIISKDLILQLLELQTRLQSIEFWSEDYGRNVTLSDIC
FAPLNPSNPALTDCAVNSLVQYFQNSKQNLDAKVNMTEEGKTMEVDWRDHFIYCVNSPLS
FQDVTDLSLSCMADYGAPVFPFLAVGGYEGSDYTNAEALILTFSLNNYPRNDVRFKLVQI
WEQMFLDIVQEYQRDPSTNFTFAYMAERSLEDEINRTTMEDIPIFMISYLVIFVYIAVAL
GEYSSCRRILVDSKLLLGLGGILVVGCSVLASMGFYAWIGIPSSLVILQVVPFLVLAVGA
DNIFIFVLEFQRDERKPEEKREAQIGRVLGSVAPSMLLCSLSESVCFFLGALSSMPAVKS
FALYAALAVLMDFLLQMTAFVALLSLDARRQDASRCDVLCCVTVGGSEKKGKSEGFLLPA
IRRYYAPFLLHTVTRVAVMVLFLFIFCSGIFLMFHVKVGLDQELALPQDSYMLEYFKYLY
KYFEVGVPTYFVTTGGYNFASVSGMNGVCSSVGCDPYSLTQKIQYATNFPKESYLAIPAS
SWVDDFIDWLNPGSRCCRLYTSGSHFGQFCPANETGLKCLKRCMKSPESGVLRPNVTEFH
KYLPYFLNDRPNLQCSKGGLGAYDKAVVRNENGDVIASRFMAYHTPLTNSQEFTDALQKA
RKLAENITMGMRKILGTDPDFEVFPYTITYVFYEQYLSIVPEGIFSISMCLLPTFVVCCI
LLGMDLLSGLLNLLTIVMITVDTVGVMTLWGIDYNAVSLINLVTAVGISVEFVSHLTRTF
AISTKTTRVERAKEATANMGSAVFAGVAMTNLPGIVVLAFAKAQLIQLFFFRLNLVITLL
GMAHGLVFLPVLLSYFGPDVNRAVLLELQEKKEQKDSERVNHVYLNAGFKDTEKNLHCDT
SAMNNGQPHTCPSNTVEGEPVQATSKL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttccgcgtttgtcgttgtcttgtgcgtcctcggtctacaccaagttgtctca
aatgccatccatcaggaaggcttttgcacgttttatgaggagtgtggtcgcaatccatcc
atcaacatcagcctgatcaagcccatcatcccttgtgtctatcgaggaccagcaaggaag
ctgagcagtctgcactaccagaggctcaaggatgtgtgtcccatgcttgacaatggggag
aacaacacctacgcttgctgctccatcaaccaactcaagtctttggaggaaagcctcacc
ctgtctaagtccctcctggtccgctgtccttcctgtgctgagaactttgcccatatccat
tgcatcaacacctgcagccccaaccagagtctgcacatcaacatcaccaggactgtcaat
gtcacaataaacgcagaggaaaaggaagctgtagtggagtaccaggcatatctgtcccga
aagtttgcagatgattctttcaactcctgcaaaaacgtgcgcatcccctcgaccgggggc
tttgccattgccaccatgtgtggaaggtatggtgccacccgctgcaacacgcaacgctgg
ttggacttccagggagatagcagcaatggtctggcccccctggatattgacttccgcctc
atccccgcaggcactactgttggtcaagggatcgtgccctacaatggcagggcccagcgc
tgcaatgaatctacatcccttggaggagaagcctgctcctgtcaggactgcatcgagtcc
tgtctcattgatgcccctccggtgtcctcgtcaggggccttcaaaattggacagttggat
ggcgtgctggtgctctgcctggtggtcttcattgcactcagcctgtcattcctggggttc
attttggtgaggaacctctgcaggggaagaagcaaagacaaagggaaagacaagaacgac
aatgtggtgagaaaagaagtcctcccctcagatgtgagattcaaagacagagccagcctg
gccactcagcatttcctggggagtcttttccaaagttggggcaccctgatggcctcccac
cccatcaaggtcataataatctcgctagttatcgtttcagcttttgccgcgggccttgtg
aaaatcgaactgaccacagatcctgtgcagctttggtcggctcccaacagccgggccaga
aaggagaaggatttccatgataaacactttgaccctttcttccgcaccaaccagctgatc
ctgactgcccccggccgcccaggctacacctacgactcactgctctttgggaagcaaaat
ttcagtggaatcatctcaaaagatcttatcctccaactcctagaactgcagacccgcttg
cagtccatcgagttttggtcagaggactatggcagaaatgtcaccctaagtgatatctgc
tttgctcctcttaaccccagcaacccagccctcactgactgtgcagttaacagcttggta
cagtactttcagaatagcaagcaaaatctggatgccaaagtcaacatgacagaggaaggg
aagacaatggaggtggattggagggaccacttcatatactgtgttaactctccactgtct
ttccaagatgtcacagacctctcactgagctgcatggcagattacggagctcctgtcttc
cccttcctggcagttggaggatatgaaggttctgactacaccaatgctgaggctctgatt
ctcacgttttccctgaacaattacccccgtaatgacgtcaggttcaagctggtccagatc
tgggaacagatgtttctggatatcgtacaagagtaccagagggatccttctaccaacttc
acctttgcgtacatggctgagagatctttggaagatgaaatcaaccgaacaacaatggaa
gacattcccattttcatgatcagctaccttgtgatcttcgtgtacatcgctgtagcgctg
ggggagtactcttcctgcaggagaatactggttgactccaagttgctgctgggcctgggg
gggattctggttgtgggctgctctgtcctggcctccatgggattttacgcctggatagga
atcccatcctccctggtcatcctgcaggtcgtgcccttcctggtgcttgcagtgggagct
gacaacatcttcatcttcgtcctggagtttcagagggatgagcggaaaccagaggagaag
agagaggcacagattggtcgagtactgggcagcgtggctcccagcatgcttctctgcagc
ctctccgagtccgtctgcttcttcttaggagccctgagcagcatgccggcggtgaagtcc
ttcgccctctacgccgcgctcgccgtgctgatggacttcctcctgcagatgacggccttc
gtggcgctgctctccctggacgcgcggcggcaggacgcctcccgctgcgacgtcctctgc
tgtgttactgtgggcggctccgagaagaagggcaagagcgagggcttcctgctgcccgcc
atcagacgctactacgcccccttcctgctgcacaccgtcaccagggtcgctgtgatggtt
ctcttcctgttcattttctgctctggaatcttcttgatgttccatgtgaaagtgggtttg
gatcaggaactggctctgccccaggactcgtacatgctggagtatttcaagtacctgtac
aagtattttgaggtgggcgtcccaacctatttcgtcaccacagggggctacaacttcgcc
agtgtcagtgggatgaatggagtgtgctcaagtgttggatgtgatccttactctctcacc
cagaaaatccagtatgccactaatttccccaaagaatcataccttgctatcccagcctcc
tcttgggttgatgacttcattgactggctcaatccaggctccagatgctgccggttatac
acatctgggtctcactttggacaattctgcccagcaaatgagactggcctgaagtgcctg
aagaggtgtatgaaatctcctgagagtggtgttctgaggcctaacgtgacggaattccac
aagtaccttccctacttcctgaatgatcggcccaacctgcagtgttcgaagggagggttg
ggggcctatgacaaagcagtggtgaggaatgagaacggagatgtgatagcctcgcggttc
atggcctatcacacccctctgaccaactctcaggagttcactgacgctctgcagaaggcc
cgaaagctggcggagaacatcaccatgggcatgaggaagatcctgggcacagaccccgac
tttgaggttttcccttacacgatcacttacgtgttctacgagcagtacctctccattgtg
ccagagggcatcttcagcatctcaatgtgtctcctgcctacttttgttgtgtgctgcatc
ctgctgggcatggacctgttgtcaggcctgctcaaccttctcaccattgtcatgatcacc
gtggataccgttggggtcatgaccctgtgggggattgactacaatgctgtctcactcatc
aacctggtcacggctgtcggtatctcagtggagttcgtttcccatctcacccgcaccttt
gccatcagcaccaagaccacccgcgtggagagagccaaggaggccacagccaacatgggc
agtgccgtatttgctggtgttgccatgacgaatctcccaggaattgtggtgctggcgttt
gcaaaggcccaacttatccagctcttcttcttccgcctcaacctggtcatcaccctgctg
ggcatggctcatggcctggtcttcctgcccgtgctactcagctactttgggcctgatgtc
aaccgcgctgtgctgctggaactccaggagaaaaaagagcagaaggattctgaacgggtc
aatcacgtctacttaaacgcaggatttaaagacactgaaaaaaaccttcattgtgacaca
agtgcaatgaacaatggacaaccacacacctgtccctccaatactgtagagggggaacct
gtccaggcaacctcaaaattgtga
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