KEGG   Lepisosteus oculatus (spotted gar): 102698928
Entry
102698928         CDS       T07349                                 
Name
(RefSeq) ras-related protein Rab-7a-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04137  Mitophagy - animal
loc04140  Autophagy - animal
loc04144  Endocytosis
loc04145  Phagosome
loc04148  Efferocytosis
loc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:loc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102698928
   04145 Phagosome
    102698928
   04140 Autophagy - animal
    102698928
   04137 Mitophagy - animal
    102698928
   04148 Efferocytosis
    102698928
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102698928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:loc04131]
    102698928
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:loc04147]
    102698928
   04031 GTP-binding proteins [BR:loc04031]
    102698928
Membrane trafficking [BR:loc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    102698928
Exosome [BR:loc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102698928
  Exosomal proteins of other body fluids (saliva and urine)
   102698928
  Exosomal proteins of colorectal cancer cells
   102698928
  Exosomal proteins of bladder cancer cells
   102698928
GTP-binding proteins [BR:loc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    102698928
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU IIGP G-alpha Septin cobW AAA_24 AAA_29 AAA_7 nSTAND1 AIG1 ABC_tran
Other DBs
NCBI-GeneID: 102698928
NCBI-ProteinID: XP_015204106
Ensembl: ENSLOCG00000014749
LinkDB
Position
LG1:complement(2758416..2764050)
AA seq 211 aa
MSHAQKPHLKVILLGNSGAGKSSFMNQYVNRRFTNLYRATIGADFFTKDITVDDRPVSLQ
SCVRFQIWDTAGTERFQSLGGALYRGAHCCLLVFDVTSAASFAALDSWRREFMVQADPPD
PQRFPFVVVGNKTDLDNREVTGKRAQDWCAELGAEYFEVSAKEDIDVDKPFLSAVRAALH
YFKDYSSETPGDYFQLASRTPEEKPEGRCVC
NT seq 636 nt   +upstreamnt  +downstreamnt
atgtctcacgcgcagaagccgcatctcaaggtgatcctgctcgggaattcgggggcgggg
aagtcctccttcatgaaccagtatgtgaaccggcgcttcaccaacctgtaccgggccacg
atcggggcggacttcttcaccaaggacatcacggtggacgacaggccggtcagcctgcag
tcgtgtgttcgtttccagatctgggacacggccgggaccgagcgattccagtccctaggg
ggcgccctgtaccgcggtgcccactgctgcctcctggtgttcgacgtcacctccgcggcc
tccttcgccgccctggactcctggaggcgcgagttcatggtacaggccgacccccccgac
ccccagcgcttccctttcgtcgtcgtgggcaacaagaccgacctggacaaccgagaggtg
acgggaaagcgcgcacaggactggtgcgcggagttgggggcggagtactttgaagtcagc
gccaaggaggacatcgacgtggacaagccgttcctgagcgccgtcagagctgcgctgcac
tatttcaaggactacagctctgagacccctggggactatttccagcttgcctccagaacg
ccagaggagaaaccggagggccggtgcgtctgctga

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