Legionella oakridgensis: Loa_00017
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Entry
Loa_00017 CDS
T03928
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lok
Legionella oakridgensis
Pathway
lok02024
Quorum sensing
lok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Loa_00017 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Loa_00017 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lok03019
]
Loa_00017 (hfq)
03036 Chromosome and associated proteins [BR:
lok03036
]
Loa_00017 (hfq)
Messenger RNA biogenesis [BR:
lok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Loa_00017 (hfq)
Chromosome and associated proteins [BR:
lok03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Loa_00017 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
DUF4503
LSM
Motif
Other DBs
NCBI-ProteinID:
AHE65608
UniProt:
W0B509
LinkDB
All DBs
Position
14323..14547
Genome browser
AA seq
74 aa
AA seq
DB search
MSSSHALQDSFLKELAKEKMPVSIFLVNGIKLHGVIACFDEHVIMLKNSITQMVYKHAIS
TVVPARPVTLPPSE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagtcatgcattacaagattcttttcttaaagaattagctaaggaaaaaatg
ccagtatccatttttctggttaacggaattaaattacatggcgttattgcgtgttttgat
gaacatgtcatcatgttaaaaaattcaattacgcaaatggtctacaagcatgctatttcc
acagttgtaccggccagaccagtgaccttgccccctagtgaataa
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