Legionella oakridgensis: Loa_00381
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Entry
Loa_00381 CDS
T03928
Name
(GenBank) DNA-directed RNA polymerase, beta, subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lok
Legionella oakridgensis
Pathway
lok03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lok00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Loa_00381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lok03021
]
Loa_00381
03400 DNA repair and recombination proteins [BR:
lok03400
]
Loa_00381
Enzymes [BR:
lok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Loa_00381
Transcription machinery [BR:
lok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Loa_00381
DNA repair and recombination proteins [BR:
lok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Loa_00381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
DUF6497
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AHE65960
UniProt:
W0B7X4
LinkDB
All DBs
Position
349798..352989
Genome browser
AA seq
1063 aa
AA seq
DB search
MAEAVANPQYSHAEKKRFRKSFGKQADMMEIPNLLDIQLKSYRDFIQADAGTKEQEKTGL
HAAFASVFPIHSFSGNARLEYVGYSLGEPAFDVRECKLRGLTYSAPLRVKVRLVVLDKDA
TGDEKPIKDIREQDVFMGEIPLMTDVGTFVINGTERVVVSQLHRSPGVIFEHDKGKTHSS
GKLLYSARIIPYRGSWLDFEFDPKDCVFVRIDRRRKLPVSILLRALGYDTESILTEFFET
TSCHLKNGEFHIDLIPSRLRGEIALFNIIAPETGEVIVEEGRRITTRHIKLMEKNNMSVL
VVPHDYLIGKVLAKDIVDTSTGEAIALANDEITSDLLDSTIEHGIHAFEMIYTNELDHGS
YISDTIRIDPTSNQLEALVEIYRMMRPGEPPTKEAAEALFKNLFFAEDRYDLSAVGRMKF
NRRVGRKEDQGPGTLTKEDILAVIKTLIDIRNGIGMVDDIDHLGNRRVRSVGEMAENQFR
VGLVRVERAVKERLSLAESENLMPQDLINAKPVSAAVKEFFGSSQLSQFMDQVNPLSGVT
HKRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLSVYARTNEYG
FIETPCRKVVNGCVTDEIEYISAIEEVDQYIAQSSVEVDGNGKILADLVPCRHQNEFSLT
TPDKINYMDVSAKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSEKPLVGTGME
RDVASDSGVCVVAKRGGVIDLVDAARIVVRVNDDETSAGETGVDIYNLTKYFRSNQDTCI
NQIPIVAKGDRIKRGDILADGPCTDMGELALGQNLLVAFMPWNGYNFEDSILISERIVQD
DRFTTIHIEELTCIARDTKLGTEEITSDIPNVGESALANLDESGVVYIGAEVAAGDILVG
KVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPSGMNGTVIDVQVFTRDGLEKDARA
KSIEEEHLARIRKDLIDERRIREEDIYHRVRTLLLDKMVTGGPGGLKSGSKITNDYLSKL
DREKWFDIRVEDDVISQQLEQLSKQLESLAKEIEKRFNDSRKK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcagttgctaaccctcaatattcacatgctgagaaaaaacgatttcgcaag
agctttggtaaacaagcggatatgatggaaatccctaatctgcttgacattcagctgaaa
tcttatcgtgattttattcaagccgatgctggaacaaaagaacaagaaaaaactggttta
catgcggcttttgcatcggtatttccaattcatagcttttctggcaatgcaagacttgaa
tacgttggctacagcttaggtgagccagctttcgatgtacgagaatgcaagttgagagga
ttaacctattctgctccgttaagagttaaagtacgactggttgtccttgacaaagatgca
actggcgatgaaaagcccattaaagatattcgtgagcaagatgtcttcatgggagagatt
ccgttaatgacggatgtgggtacatttgttattaatggtacagagcgagttgttgtctcg
caacttcatcgttccccaggagttatttttgaacatgataaaggtaaaacacattcttct
ggcaaattattatattcagccagaattatcccttatcgtggctcatggcttgattttgaa
ttcgaccccaaagattgcgtatttgttcgtatcgaccgtcgtcgtaaattacctgttagt
attttgttgcgcgcattaggttatgatacggaatccattctaaccgagttttttgagaca
acgtcctgtcatttgaaaaatggtgagttccatattgacctcattccatcacgattacgt
ggtgaaattgcattatttaatattattgctccagagacaggcgaagttattgttgaagaa
ggaagaagaataacaacaagacacattaaattaatggaaaagaacaatatgagtgttctt
gttgttcctcatgattacttgattggtaaagtacttgccaaagacatcgttgatacgtca
acgggagaagcgattgctctggctaacgatgaaattacaagcgatctcttggattccact
attgagcatggaattcacgcgtttgaaatgatttatactaacgaattggatcatggttct
tatatatccgatacaattcgtattgatccaacatcaaaccaattagaagcgttagtagaa
atttatcgaatgatgcggccaggtgagcctcccaccaaagaagctgctgaagcattattt
aaaaatctgttctttgcggaagaccgttatgatctttcagcggttggacgtatgaagttt
aatcgcagagtaggtcggaaagaagatcaggggcccggcacgctgactaaggaagatata
ctggctgttattaaaacattaatcgacattcgcaacggtattggcatggttgatgacatt
gaccatttaggaaatcgtcgcgtacgtagtgtcggtgaaatggctgagaatcaattccgt
gtaggtttggttcgtgtagaacgtgcggtaaaagaacgcttgagcttggctgagtcagaa
aatcttatgccacaagatttaattaatgccaaaccagtatctgcagctgtaaaagagttt
tttggctcaagtcagctttcacaatttatggatcaggttaatccattatcaggtgttact
cataaacgccgtgtttctgcattgggaccaggtggtttaactcgcgaaagagctggattt
gaggttcgtgacgttcataccacccattatggtcgagtgtgtcccattgaaacgcctgaa
ggtccgaacattgggttgattaattccttgtcagtttatgcaagaacaaatgagtatggg
ttcattgaaacaccatgcagaaaggtggttaatggatgtgttaccgatgaaattgaatac
atttctgccatcgaagaagttgaccaatacattgcgcaatccagcgtcgaagttgacgga
aatggcaaaattttagcggatttggttccttgtcgacatcagaacgaattttcgctgacg
actccggacaaaattaactacatggacgtgtcggcaaaacaaatcgtgtctgtagcggct
tctctgattccatttttggagcatgatgatgctaaccgtgccttgatgggttccaacatg
caacgacaagctgttccaacgttgcgctctgaaaaaccgttggttggtactggaatggag
cgggatgttgcttctgattcaggagtatgcgtggttgcaaaacgtggtggtgttattgac
cttgtggatgctgcacggattgtggtgcgtgttaatgatgatgaaacatccgctggtgaa
acaggggttgatatttataacctgacgaaatacttccgctcaaaccaagatacttgcatt
aatcaaattccaattgttgcgaaaggcgaccgtatcaaacgcggtgatattctcgctgat
ggtccatgcacagacatgggagaattggcattaggtcaaaatcttcttgtcgcttttatg
ccttggaacggttataactttgaagattctattttgatttctgagcgcattgtccaggat
gatcgatttacaacgattcatattgaagaattaacttgcatcgcacgagatacaaaatta
ggaacagaagaaattacttctgacataccgaatgtaggggaatcagcattagctaattta
gatgagtctggtgttgtttacattggtgctgaagtggctgctggcgatattctcgttggt
aaagtcacgccaaaaggtgaaacgcagttaacgcctgaagaaaagctgttaagagccatc
tttggtgaaaaagcttctgatgtaaaagattcatcattgcgtgtgccgtcaggaatgaat
ggtaccgttattgatgtacaagtctttactcgcgatggccttgaaaaagatgcacgtgcc
aaaagcatcgaagaagaacatcttgcgcggatacgaaaggatttgattgatgagcgacgc
attcgagaagaagatatttatcatcgtgtgcgtacgttactgttggataaaatggtaacg
ggtggccctggcggtttaaaatcaggatcaaaaataaccaacgattatttaagtaagctt
gatcgtgaaaaatggtttgatattcgtgtagaagacgatgtgataagccaacaacttgag
caattgtctaaacaattggaatccttggctaaggaaattgaaaaacgatttaatgatagt
cgtaaaaaataa
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