KEGG   Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_01470
Entry
Lokiarch_01470    CDS       T04015                                 
Name
(GenBank) Exosome complex component Rrp41
  KO
K11600  exosome complex component RRP41
Organism
loki  Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:loki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lokiarch_01470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loki03019]
    Lokiarch_01470
Messenger RNA biogenesis [BR:loki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Lokiarch_01470
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Lokiarch_01470
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: KKK46414
LinkDB
AA seq 254 aa
MPLIIKDEYPEKLFRKDGKRLDGRDLNELRPIKMEVGVIKNADGSAYLEWGNNKIYAAVY
GPREVHPHHLAKPDRGILRVFYRMATFSVFDRKRPAPGRREKEISMVITDCLKPVLFLEL
YPGTSFEVYIEVMDADGGTRCASTTAAALALADAGIPMKSLVTGIAVGKIDGKKVVDLSG
IEDKAGEADLPVAITWYNEEFSLLQFDGDMDIDELNDFLDLAKNALKDIYQMQLDSLKKK
YISIQEKDSKEGDD
NT seq 765 nt   +upstreamnt  +downstreamnt
atgccactaataattaaagatgaatatcccgaaaaactgtttcgtaaggatggaaagaga
ctagatggtagggacctaaatgaattaagacctattaagatggaagttggtgttatcaaa
aatgcagacggatcagcctatcttgaatggggtaataataaaatatatgctgctgtttat
ggaccaagagaagtccacccacatcatttagctaaaccagatcgagggattcttagagtt
ttttatagaatggccacattttcggttttcgatagaaaaagaccagcaccagggcggaga
gaaaaggagatttctatggtcataactgattgtctaaaaccagttctatttttagaacta
taccccggtactagttttgaagtttatattgaagtaatggatgcagatggaggtactaga
tgtgcaagcactacagctgcagctcttgctttagctgatgcaggaatcccaatgaaaagt
ttagttacaggaatcgcagtaggaaagatagacgggaaaaaagtagttgatctttctgga
attgaagataaagctggtgaggctgatttacctgtcgcaataacctggtataatgaagaa
ttttctctgttgcaatttgatggagacatggatattgatgagctgaatgacttccttgat
ttagccaaaaatgcattaaaagatatctaccaaatgcaattagattcacttaagaaaaaa
tatatatcaattcaagaaaaagactcaaaagagggtgatgattaa

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