Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_03710
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Entry
Lokiarch_03710 CDS
T04015
Symbol
tfb_1
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Lokiarch_03710 (tfb_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loki03021
]
Lokiarch_03710 (tfb_1)
Transcription machinery [BR:
loki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Lokiarch_03710 (tfb_1)
Prokaryotic type
Archaeal type
TFB
Lokiarch_03710 (tfb_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
zf-RRN7
RB_B
TF_Zn_Ribbon
A2L_zn_ribbon
DUF4428
Motif
Other DBs
NCBI-ProteinID:
KKK46159
UniProt:
A0A0F8XVY5
LinkDB
All DBs
AA seq
307 aa
AA seq
DB search
MPSPFKDNDFFEESKEGGPPCCDNPKISEEDGFYVCRNCGNVYSRILDDSPRRAFTQEEI
QNRKSNERVYSPIGPRTIIRGSRDARGTLLSPKSKSNFNRLAKIHRSLTTSFERNLWIAL
PNLQRLQKRLGIPDAAADDALRIYTETVKKKLTMGRSIDTLLSASIFAALRVHGIPRTAE
EITRIAQIPKKKVIKSYRLILMEILPKLGMKVQHFTADRYVDKFNEELKLSMQCRNIAVK
LIKKATESGFNSAGKDPKGIAAAAIYIGSKISNENRTQKEISRLAMVTEVTLRMRVKDLQ
KYANVIQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccttttaaagataatgatttctttgaggaaagtaaagaaggtggtccacca
tgttgtgacaatccgaaaattagtgaggaagacggtttttatgtttgtcgaaattgtgga
aatgtttattcacgaattcttgatgatagtcctcgtcgagctttcactcaagaagaaatc
caaaatcgaaagagtaatgaaagagtgtatagtcctatcggaccaagaactattattagg
ggttctagagatgcgagaggtaccctattaagccctaaatctaagtcaaactttaatagg
ctagcaaaaattcatagatctttaacaactagtttcgaaagaaatttatggattgctttg
ccaaatttacaacgtttacaaaagagattaggaattccagatgcagcggcagatgatgct
cttcgaatctacactgaaactgtgaagaaaaaactgacaatgggtaggagtattgataca
ttattatcagcatcaatatttgccgccttacgagttcatggaatacccagaacagctgaa
gaaataacaagaattgctcagattccaaaaaaaaaagttataaaaagttatcgcttaatt
cttatggaaatacttcctaagcttggtatgaaggttcaacattttactgctgaccgctat
gttgataaatttaatgaagaattaaaactttctatgcaatgtaggaatattgctgtaaaa
ttaattaaaaaagctactgagagtggatttaattcggctggcaaagatccgaagggaatc
gccgcagcagcaatctatattggctcaaaaataagtaatgaaaatagaacgcagaaagag
atcagcagattagcaatggtaacagaggtaacattgaggatgcgggttaaagatctgcaa
aaatacgccaatgtgattcagtga
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