KEGG   Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_20510
Entry
Lokiarch_20510    CDS       T04015                                 
Name
(GenBank) Exosome complex component Rrp42
  KO
K12589  exosome complex component RRP42
Organism
loki  Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:loki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lokiarch_20510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loki03019]
    Lokiarch_20510
Messenger RNA biogenesis [BR:loki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Lokiarch_20510
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Lokiarch_20510
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: KKK44170
UniProt: A0A0F8W7Y4
LinkDB
AA seq 274 aa
MMDVRRIISRIEKNYIKSNLKKEERIDGRGLWDYRDFTIEADIIASAEGSADVLLGETRI
MTGLKYEIGVPFPDLPDAGVCTLMAELLPLASPLFERGPPSEESIELARVVDRGIRHADC
VQTKKLCIKEKEAVYILFVDMYVLNHAGNLIDTGAISAITTLLSCHLPEGKMGEDGLEWT
GNYLTADDIINELPIAITYGKIDDMIFVDPNLPEELVSEGRISISVTENKITSIQKSGVA
TFSIDEIKMLGKKSLELGKKLRKELNLSQYKYSK
NT seq 825 nt   +upstreamnt  +downstreamnt
atgatggacgttagacgtattatatcaaggattgaaaaaaattacattaagtcaaatttg
aaaaaagaagaaagaattgacggtagaggcctttgggattatcgtgattttactattgag
gcagatattattgcttctgctgaaggatctgctgatgtgttattaggggagacaaggatc
atgactgggttaaaatatgaaatcggagtaccatttccagatctcccagatgcgggtgta
tgtactttaatggcagaattacttcctttagcatcaccattatttgaaagaggtccacca
agtgaggaatctattgaattagctcgggtagtagacagaggaattcgtcatgcagattgt
gttcagactaaaaaattatgtattaaagaaaaagaagctgtttacattctatttgttgat
atgtacgtattgaatcatgctggaaatttaattgatacaggagcgattagtgcaataaca
actctactttcttgtcatctccccgaagggaaaatgggcgaagatggtctcgaatggaca
ggaaattacttaactgcggatgatattataaatgagttacctatcgcaataacatatgga
aagattgacgatatgatttttgttgatccaaatctacctgaagaattagtatctgaggga
agaatttctatatctgtcactgaaaataaaataacatcaattcagaaaagtggtgttgcg
acattttcaattgacgagattaaaatgcttggtaaaaaatcactggaacttggcaaaaaa
ctcagaaaggagttaaatctttcacaatataaatactctaaataa

DBGET integrated database retrieval system