Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_47590
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Entry
Lokiarch_47590 CDS
T04015
Symbol
fen
Name
(GenBank) Flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03030
DNA replication
loki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lokiarch_47590 (fen)
03410 Base excision repair
Lokiarch_47590 (fen)
03450 Non-homologous end-joining
Lokiarch_47590 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loki03032
]
Lokiarch_47590 (fen)
03400 DNA repair and recombination proteins [BR:
loki03400
]
Lokiarch_47590 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loki04147
]
Lokiarch_47590 (fen)
DNA replication proteins [BR:
loki03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Lokiarch_47590 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Lokiarch_47590 (fen)
DNA repair and recombination proteins [BR:
loki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Lokiarch_47590 (fen)
Exosome [BR:
loki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Lokiarch_47590 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
HHH_2
DUF6483
Motif
Other DBs
NCBI-ProteinID:
KKK40881
LinkDB
All DBs
AA seq
353 aa
AA seq
DB search
MGIKISDLVKEVKRTIIFENLLNKNIAIDAFNTIYQFLAIIRQRDGTALMDYQGNVTSHL
SGLFYRSINFLENRIKPIYVFDGTPSELKLETILERKNIKLAAKKKMIEAQEAEDFREAK
KFAQMTSKLDSGMIEESKKLIESMGMPIVQASSEGEAQSAYMVSVGDAWACASQDYDTLL
FGGQRLIRNFAINRSKKVKDTTVNLEIEYISLSKLLQSLEITHEQLVEMGILIGTDFFPG
IKGIGQKIALDLIKKYGSLESILKSNVKVRNKEILLEPELVARVKNLFLSPDVEKNYTVP
KSKKINFERIEELLIEQHNFSKQRVENGLNRLRKLDSKKTQVSLDDFLKNSKS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggcataaaaataagtgatcttgttaaagaagttaaacgaactataatatttgaaaac
ctcttgaataaaaatatagcaatagatgcctttaatacaatttatcaatttttagcaata
attcgccaaagggatgggactgctttaatggattaccagggaaacgtaacatcccattta
tctggattattctatagaagtattaacttcttagagaatagaatcaaacctatttatgtc
tttgacggcaccccttctgagttaaagttagaaacaattctggaacgtaaaaatattaaa
ttagctgcaaaaaaaaaaatgattgaagctcaagaagctgaagattttagagaagcaaaa
aaatttgctcaaatgacttccaaacttgatagtgggatgatagaagaaagtaaaaaacta
attgaatcaatggggatgccaatagttcaagcaagttcagagggtgaagctcaatctgca
tatatggttagtgttggagacgcatgggcttgtgcttctcaagattatgatacgttactt
tttggtggacaaagattaatacgtaattttgccatcaaccgaagtaaaaaagttaaagat
acaaccgttaatttagaaattgagtatatttccttatccaagttattacaaagtttagaa
ataactcatgagcagttagtagaaatgggaatcctaattggaacagatttttttcctgga
attaaaggaattggtcaaaaaatagctttagatttaattaaaaaatatggatctttagaa
agtatcttaaaaagtaatgtgaaagttaggaataaagagattcttttagaaccagaatta
gtagctcgggtaaaaaatctttttttatctcctgatgttgaaaaaaactatacagttccc
aaatctaagaaaattaattttgaaagaatagaagaattactaatagagcaacataatttt
tcaaaacagagagtagaaaatggtttaaatagattgagaaaactagattctaagaaaact
caagtttctttggatgattttcttaagaactccaaaagttag
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