KEGG   Paucilactobacillus oligofermentans: LACOL_1422
Entry
LACOL_1422        CDS       T06755                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
lol  Paucilactobacillus oligofermentans
Pathway
lol03030  DNA replication
lol03430  Mismatch repair
lol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LACOL_1422
   03430 Mismatch repair
    LACOL_1422
   03440 Homologous recombination
    LACOL_1422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lol03032]
    LACOL_1422
   03400 DNA repair and recombination proteins [BR:lol03400]
    LACOL_1422
Enzymes [BR:lol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LACOL_1422
DNA replication proteins [BR:lol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LACOL_1422
DNA repair and recombination proteins [BR:lol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LACOL_1422
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_30 AAA_5 AAA_22 TIP49 AAA_14 AAA_19 AAA_assoc_2 AAA_24 AAA_7 AAA_16 Rad17 AAA_18 PIF1 Erf4 DUF815 AAA_2 RNA_helicase Mg_chelatase ELF AAA_28
Other DBs
NCBI-ProteinID: CUS26743
UniProt: A0A0R1RX94
LinkDB
Position
I:complement(1452285..1454039)
AA seq 584 aa
MSYQALYRVWRPQRFDEIVGQQIITTTLKNALISNQTSHAYLFTGPRGTGKTSAAKIFAK
AINCQFLKDGEPCNECETCKEITSGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTIAEY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPLTIISRTQRFDFRRISA
EQSFERMKYILDQKNVTYDEQALWIIARAAEGGMRDALSILDQVISFSNNKVEVENALLV
TGSVTKGLLHQYVEQITDHDGAKALETMQNIMNEGKDGQRFIEDLISFIRDLLLYQKAPS
MVNVESTGLSADELKQLGDKVTADIWYEAIDTLNEIQQEMRFTTHPDVYLEVLTIKLAQL
SGQSNQPKAVVENDSRVDQLQQQMAKMQAEIKKLANGAGTAIPPQTVVKKPRVSVSKNAP
KVNLAKVYPILEIATKEDLVNLRDLWGDMLDMLTVPQRSMLHVSNPVAASASGVIVSFDY
SLLYQEAADDAELLQKMHDNLEKLSGNDRDIIFVSKEQWPSIRQGYIDQLAGKKQSGEVV
DEEPSDGDTPETGENSTSNSTKDDKIVSEAQELFGNEIVEIKND
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgagttatcaagcattgtatcgagtttggcggccacaacgatttgatgaaattgtgggt
caacaaattattaccacaactttaaaaaatgcgttaatttctaatcaaactagtcatgcg
tacttatttaccggacctcgtgggaccgggaagacgtcagccgctaaaatttttgctaag
gcaattaattgccaattcttaaaagatggcgaaccatgtaatgaatgtgaaacttgtaaa
gagataacaagtggtcagttaaatgatgtaattgaaattgatgctgcttcaaataatggt
gtagaagaaatccgtgatattcgggataaagctaaatacgcacccacaattgcagaatat
aaagtttatattattgatgaagttcatatgttatcaaccggggcatttaatgcactatta
aaaactttagaagagccaccagcaaatgtggtatttattttagcaacaactgaaccgcat
aaaataccgttgacgattatttcaagaacacaacgatttgattttagacgaatttctgcg
gaacaaagttttgaacgaatgaaatacattttagatcaaaaaaatgtgacttatgatgaa
caagccttatggattatcgcacgagcagccgaaggtgggatgcgtgatgcattaagtatt
cttgatcaagtaatttcatttagtaataataaggttgaagttgaaaatgcactcttggta
acgggaagtgttacaaaaggattattacatcaatatgttgaacaaataactgatcatgat
ggggctaaggcgcttgaaacaatgcaaaatattatgaatgaaggtaaggatggtcaacga
tttatcgaagacttaatttcatttattcgtgatttgctgttgtatcaaaaagcaccctca
atggttaatgttgaaagtaccggtttgtcagcagatgagttgaaacaattaggtgataaa
gtcaccgcagatatttggtatgaagcaattgatactttaaatgaaattcagcaagaaatg
cgatttactacgcatccagacgtttatctagaagtcctaacgataaaattggcgcaatta
agtggtcaatcaaatcaacctaaagcggtggttgaaaatgattcacgagttgatcaatta
cagcaacaaatggctaaaatgcaagctgaaattaagaaacttgccaatggcgcaggtact
gccattccaccacaaaccgtagttaaaaagccacgtgtaagtgttagcaaaaatgcccct
aaggtaaatttggcgaaggtttatccaatattagaaattgccactaaggaagacttagtt
aatctgagagatctttggggtgatatgctggatatgttaacagtgccacaacggtcaatg
ttacatgtatcaaatcccgtcgctgcaagtgcaagcggagtaattgtttcgtttgattat
agtttgctctatcaagaagcagctgatgatgctgaattgcttcaaaaaatgcatgataat
ttagaaaaacttagtggcaatgaccgagatattatctttgtttcgaaagaacaatggcca
agcattcgtcaaggatatatcgatcagttagctggtaagaagcagtctggtgaggttgtt
gatgaagagcctagtgacggtgatacacctgaaactggtgaaaatagtacaagtaattca
acaaaagatgataagatagttagtgaagcacaagaattattcggcaatgagattgttgaa
ataaaaaatgattaa

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