Leptotrichia sp. oral taxon 847: AXF11_09895
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Entry
AXF11_09895 CDS
T04653
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lot
Leptotrichia sp. oral taxon 847
Pathway
lot03410
Base excision repair
lot03430
Mismatch repair
lot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXF11_09895
03430 Mismatch repair
AXF11_09895
03440 Homologous recombination
AXF11_09895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lot03400
]
AXF11_09895
DNA repair and recombination proteins [BR:
lot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AXF11_09895
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AXF11_09895
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AXF11_09895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF5677
Toprim
DUF6536
Motif
Other DBs
NCBI-ProteinID:
AMD96067
UniProt:
A0A0X8JWC6
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All DBs
Position
2100032..2101672
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AA seq
546 aa
AA seq
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MSKSSEFGESKLITRLLLNRGIDTRKKVEKFLNTSENDLLDPFLFENMEKVVERIKLAKL
KKEKVVIYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGFGINKSTLNFLKRRDT
KLFITVDISINSRKEIMLLKESGIDIIVTDHHRQTTVCDEMEILTINPKISKSYPNKYLS
GSGVAFKVACAVYERFGISKKTLYDYLDIVMIGTVADVVPMVNENRFIIKKGLNNIKKTK
IKGLKYIINYLKINPKNITTSDIGFLIAPIFNALGRIDNSKIVVNFFIQEDDFKLISIIE
EMKKANKIRRYLENEIYNEIEEKIQKLNRPKYIFLKSRRWHSGVVGVVCSRISIKYNIPV
ILVSIKNGYGKASCRSIEGINIFDMLKEISTKLDRFGGHDLAAGFLVSEKYLLEVERYLR
QKLVSKNREDVEKVLNIDSWLNIKSINKRKLSDINRLAPFGLDNPEPNFIDTEVEFIKIS
KFGINNRHFKGFAKKNDRVISMIGYNLGHKLKVRNLNERKYRVIYTPIFKTVYSDLYIEL
RIKDFI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagttcggagtttggcgaaagtaaattaattacaaggcttttgctgaataga
ggcattgatacacgaaaaaaagttgaaaaatttttaaatacaagcgaaaatgatttacta
gatccgtttttgtttgaaaatatggaaaaagttgtagaaagaataaaattagcaaaatta
aaaaaagaaaaagttgtaatctatggagattatgatgtagatggaatttcaggagtcgca
tatttggtcattatgctaagaaaattgggattaaatgtcgactattacattcctaatcgt
gtacacgaaggttttggaataaataaatccaccttgaattttttgaagcgaagagataca
aaattatttattacagtggacatttctataaatagtcgcaaagaaataatgttgttaaaa
gaaagtggaattgacataattgtaacagaccatcacagacagacaactgtttgtgatgaa
atggaaattttgacaatcaatcccaaaataagtaaaagttatccaaataagtatttatct
ggttcgggagttgcatttaaagtggcctgtgccgtttatgaaagatttgggataagcaaa
aaaacactttatgattatttggatattgttatgattggtacagttgcagatgtagttcca
atggtcaatgaaaatagatttataataaaaaaaggattaaataatataaaaaaaacgaaa
ataaaaggtttaaagtatattattaattatttgaaaataaatccaaaaaatattacaaca
agtgatattggatttttgattgcaccgatttttaatgcgcttggaagaattgataattct
aaaatcgtagtaaatttttttattcaggaagatgatttcaaattaatctccattatcgaa
gaaatgaaaaaagccaataaaataagacgttacttggaaaatgaaatttataatgaaatt
gaagaaaaaatacaaaagttaaatcgtcccaaatatatttttttgaaaagtagaagatgg
cattctggcgtcgtgggagttgtgtgttcacgaatttctataaaatataatataccagtt
attctggtctcaataaaaaatggctatggaaaggcgtcttgccggagtattgaaggaatc
aatatttttgatatgttaaaagagatttcaacaaaattggatcggtttgggggacacgat
ttagcggcaggatttttagtttcagaaaaatatcttcttgaagtggaaagatatttgcgg
cagaaattggtcagtaaaaatcgggaagatgtggaaaaagttttaaatatagattcttgg
cttaatataaaaagcattaacaaaagaaaattaagtgatataaatagacttgctccattt
ggattagataatccagaaccaaattttatcgacaccgaagttgagtttataaaaatttca
aaatttggaataaataatagacattttaaaggatttgccaaaaaaaatgacagagttatt
tctatgattgggtataatttaggacataaattgaaagttagaaatttgaatgaaagaaaa
taccgagtgatttatacaccaatatttaagacagtatattctgacttgtacatcgaatta
agaataaaagactttatttaa
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