Lysinibacillus pakistanensis: GDS87_02820
Help
Entry
GDS87_02820 CDS
T06280
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02016
iron complex transport system substrate-binding protein
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpak02000
]
GDS87_02820
Transporters [BR:
lpak02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron complex transporter
GDS87_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
HTH_23
Neugrin
Motif
Other DBs
NCBI-ProteinID:
QGG49934
LinkDB
All DBs
Position
620527..622407
Genome browser
AA seq
626 aa
AA seq
DB search
MNYEAYMLLWQNAYIKLKQIDYVQNIPVRMTKVMKYSSLLIITEGAAEIMIDDQPYFVQR
FTIFHIGKSQSLHITAQDKLSYYLIYYRGDIVYTDAFMQHLQMQYQPFQTSFSCISANPI
AIHSLLQNMYIKWQSGSIQEHLSVKASFYELIYRVFQELVEGYGEPHEIDKAEVARLYIE
QHINESLSIQKLADLLNISTRHLLRIFKARFEVGPQVYLQQLRIEHAKKYLLANQFSIKE
IAVSLGFEDEYYFSRAFKKVTKMAPSNYRLNYPSNMSEITITIENSFQYNENQLAQANRF
KNEEMITNRIQHLKLPFLLKLLVLLSAYGGESKHHSRRLTTNEAMTKTVIDDSGREVVIP
MKAERIVTDWYLGQMLALDVVPVGAVTANLDFAAFLKPYYKNEDILNVGTDGNVSIEKTA
KLKPDLIVTWNPEDVGKYEKIAPTIVFSDTAYKTATDEIKAMGEYLGRQQEADAFINDFE
SRIAKAQEKVNAVVSEDSTFTIFDLFAKKATVVGNKSVSGGRALYQILGVKPQEMVQNLF
DTKDPSLGRYEIPYEVVGDYVGDYVFVINFFNKEGEFPSTWTNLDVVKKRKTLQLASEFY
FASDPLSGLHQAEDLADKIIEFTLAK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgaggcctatatgctgctatggcaaaatgcatatatcaagttaaagcaaatt
gactatgtacagaatattcctgtgcgaatgacaaaagtaatgaaatatagctcattatta
ataattactgaaggtgctgcagaaataatgattgatgaccaaccttattttgtacagcgt
tttactatttttcatattggaaaatcccaatccttacatattacagctcaagataaattg
agttattatctcatctactatagaggggatattgtttacacagatgcatttatgcagcac
ttacagatgcaatatcaaccattccaaacatctttttcatgtatatcagcaaatcctatc
gctattcattctttgctgcaaaatatgtatatcaaatggcagtccggttctattcaagag
catttatcagtaaaggcttctttttatgagcttatttatcgtgtttttcaagaacttgtg
gagggatatggagagcctcacgaaattgataaagctgaagtagcccgcctatatattgag
caacacattaatgaatctttatccattcaaaaacttgcggatttactcaacattagtaca
cggcatttattacgaatttttaaggctcgttttgaagttggtccacaagtttacttacag
caattgagaatagaacacgcaaaaaaatatcttcttgccaatcaatttagtattaaagaa
atcgctgtctcattgggatttgaggatgaatactattttagtcgagcctttaaaaaggtg
acgaaaatggccccaagtaattataggctgaattatccatctaatatgtccgaaatcacc
attacaattgagaacagttttcaatacaatgagaatcagctagcgcaagcaaatcgattc
aaaaatgaagaaatgataacaaatagaatccaacatctaaagctaccttttttacttaaa
ttattggttttactttcggcatatggtggagaaagtaaacaccattcccgtagacttaca
acaaatgaagcgatgacaaaaacggtcatagatgatagtggacgtgaggtagttataccc
atgaaagcagaacgtattgtaacagactggtaccttggtcaaatgctagcgttagatgta
gtaccagtaggagctgtaacagcaaatttagactttgcagcattcttgaaaccatattac
aaaaatgaagatattttaaatgttggaacagatggtaatgtgtcgatagaaaaaacggca
aaattaaagcctgatttaattgttacgtggaatccagaagatgtagggaagtatgaaaaa
attgcaccaacgattgtattctctgatacagcctataaaacggctactgatgaaattaag
gcaatgggagaatatttaggaagacagcaggaagcggatgcctttatcaacgatttcgag
agtcggatagccaaggcacaagagaaagtaaatgctgttgtatcagaagattccacattt
actatatttgatttattcgcaaagaaagccacagttgtggggaataaaagcgtatcgggt
ggaagggcattatatcaaattcttggcgtaaaacctcaggaaatggtgcaaaatcttttc
gatacaaaagatcctagtcttgggcgttatgaaattccctatgaagtcgtgggagactat
gttggggattatgtttttgtgataaatttcttcaataaagaaggagagtttccatcaacc
tggaccaatctagatgttgtaaagaaaaggaagacgcttcagttagcatcagaattttat
tttgcctctgatccactttctggattacatcaagctgaagatttagctgacaaaattata
gaatttacactagctaaataa
DBGET
integrated database retrieval system
