KEGG   Leishmania panamensis: LPMP_080080
Entry
LPMP_080080       CDS       T06539                                 
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
lpan  Leishmania panamensis
Pathway
lpan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_080080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lpan03041]
    LPMP_080080
Spliceosome [BR:lpan03041]
 Complex A
  U2 snRNP components
   U2 related factors
    LPMP_080080
 Complex B
    LPMP_080080
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 SecA_DEAD
Other DBs
NCBI-GeneID: 22572470
NCBI-ProteinID: XP_010704140
UniProt: A0A088RIT6
LinkDB
Position
8:19401..22010
AA seq 869 aa
MPKRVRDADDDLGPSTSESGETDSMKDTVSGTSAMYERLHGPLDDDSSLASSTTTTSSLD
PEDSEDDNTSKRLLLYAKVTAGAKAQAAGSMSAAAAAAQSGPAAFLRGLNSSTSTTSASA
AAAALNRLKSELLKPVAQPTALTVVNAEDESAHVLTSIVSRKLPPPPAGDAKKLRQLAYV
DHSQMHYAPIRTDFYVVPPDMTNLTADEMRALLKELDGAKVHGQNVPRPMRSWDGTGLPD
RVLEELEKHGYRCPFAVQSLGSPALMSGRDLLLTAKTGSGKTLCYALPLLRHCADQPRCE
KGEGPIGLVLVPTQELAVQVFTLLNELGEAAGLRCVASYGSTSLAENIRHAKTGCEMMVA
TPGRLLDLLTVNGGKAMSLSRVSFVIVDEADRLFDSGFMEHVEAFLKNIRPNRVTGMISA
TMPKELRGAVVQHLQNPVVISVGGKPTPASNVEQQFFFVDEEVYDANNIKADMTPRLVKL
LALLGEEGGNGQNLILIFTQRKEEVDELLGRLTTLGYANRVATLYSGMDPIDREFALEHF
APGKQFILVATAVAERGLDIPYLGLVINYRLPNHYEAYVHRIGRTGRAGRSGRAVSFFTR
GKDDDIAPELVEGLERAEQRVPEELYEVAEKVRALRKSGDARYNSGFFRGYRDAKVQFFT
DRNKKEKVREAARAAGLEQFLSSSSSSDSDASSDEDANITAVPVQSRARAASVEEAGANA
MALMLHRGALNGALTLSSAQEDRISKALAFAQKTTTAATAAADEMTTVRFQSEYPINDLP
DAVRGKLQSGTFMRSVAEMTETSLIRKGVYFDPRYKHSRRMKEGEKPLYLLVVGKSMEAV
RAARNKLDEVKAELLSKQKKTVSVTGATL
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgcctaagcgtgtgcgcgatgctgatgacgacctagggccatccacctcggagagcgga
gagacggactcaatgaaggacaccgtatctggcaccagtgccatgtacgagaggcttcac
ggtcctcttgatgatgattcgtctcttgccagcagcactaccacgacttcttccctcgac
cccgaggactcagaagacgataacacatcaaagcgtctgctgctgtacgccaaggtgacg
gcaggcgcaaaggcacaagcagcaggctcaatgtccgctgcggctgccgcagcacaaagc
ggccctgccgcatttctgcgaggtttgaatagcagcactagtaccacctccgcgagtgct
gctgcggcggcgctgaatcgcctgaaatcggagctgctcaagccagtggcacagccgacg
gccttgaccgtggtgaatgcggaggatgaatccgctcatgttcttaccagcatcgtgtcg
cggaagctgccgccaccgccagcgggtgatgccaagaagctgcgtcagctggcctacgtt
gaccacagccagatgcactacgctcccattcgcacagacttctatgtggtcccgccggac
atgacgaacctcaccgctgacgaaatgcgggctttgctaaaggaactggatggggccaag
gttcatgggcagaatgtgccgcgaccaatgcgctcttgggacggcaccggactgccggat
cgcgtgctggaggagctggagaagcacgggtataggtgccctttcgcagtgcagtcgctc
ggctcacccgcgctaatgagcggacgcgacttactcctcactgcaaagacggggtcaggc
aaaacgctctgttacgcgctgccgctcctccggcattgcgcggaccagccgcggtgtgag
aagggtgagggccccatagggctggtacttgttcccacgcaggagctcgctgtgcaagta
ttcacgctgctcaacgagttgggcgaggccgccgggctacgctgtgtcgcctcgtacggc
agcacgtcgctagcggagaacatccggcacgccaagacagggtgcgagatgatggtggcg
acgccgggtcgactgctagaccttctcaccgtgaacggcggcaaagcaatgagcctgtcg
cgcgtttcctttgtcatcgttgacgaggcagatcgcctcttcgacagcggcttcatggag
cacgtggaagcctttctgaagaacatacgccccaaccgcgtaacgggtatgataagcgct
acgatgccgaaagagctgcgcggggcggtagtgcagcaccttcagaaccctgttgtcatc
tccgtcggcggaaaaccaacgcctgcgtcaaatgtcgagcagcagtttttcttcgtcgat
gaggaggtgtacgacgcgaacaacatcaaggcagacatgaccccacgtcttgtgaagctg
cttgcgctgctgggcgaggagggcggcaacggtcagaacctgatcctcatcttcacacag
cggaaggaagaggtggacgagttgttggggcggctcacgaccttgggctacgcaaaccgc
gtggcgacactctacagcgggatggatcccatcgaccgcgagttcgcgcttgagcacttt
gccccaggcaaacagttcatccttgtcgccactgcagtcgcagagcgcggtttggatatt
ccgtacctcggcctcgtcattaactaccgcttgccgaaccattatgaagcgtatgtgcat
cgtattggccgcaccggccgggccggccgcagcgggcgtgccgtgagctttttcacccgc
ggcaaggatgacgacatcgcaccggagctggtggaagggcttgagcgcgcggagcagcgg
gttccagaggagctgtacgaggttgccgagaaggtgcgagccctgcgcaagtctggcgat
gctcggtacaacagcggcttttttcgcggctaccgcgacgcgaaggtgcagttcttcact
gatcgcaataagaaggagaaggtgcgggaggctgcccgcgcggccgggttggagcagttt
ctgagctcctcctcctcttccgactcggatgcctctagcgacgaggatgccaacatcact
gcggtgcccgtgcaatccagggctcgtgctgcgtcagtggaggaggcaggggcgaacgcg
atggcgctgatgctgcaccgtggtgcactaaacggcgcgttgactttgtcctctgcgcag
gaggaccgcatctccaaagccctggcattcgcgcagaagacaaccacggcggccacggcg
gcggcagacgagatgacgacggtgcgctttcagagcgagtaccccatcaacgacttgccg
gatgccgttcgcggcaagctgcagagcggtacgtttatgcgctctgtcgctgagatgacg
gagacgtcattgatccgcaagggtgtgtacttcgatccacgctacaagcactctcggcgg
atgaaggaaggagagaagccattgtatcttctggtagtcggaaagtccatggaagcggtg
cgggcagctcgcaacaagctcgacgaggtaaaggcagagctactgagcaaacagaagaag
acggtgtctgtgacgggggccactctctag

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