KEGG   Lacticaseibacillus paracasei subsp. paracasei: LBPC_2583
Entry
LBPC_2583         CDS       T04768                                 
Name
(GenBank) excinuclease ATPase subunit
  KO
K03701  excinuclease ABC subunit A
Organism
lpap  Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LBPC_2583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpap03400]
    LBPC_2583
DNA repair and recombination proteins [BR:lpap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LBPC_2583
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LBPC_2583
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N DnaJ_CXXCXGXG AAA_29 nSTAND1 AAA_16 AAA_21 RsgA_GTPase AAA_23 AAA_25 nSTAND3 zf-TFIIB Viral_helicase1 ATPase NRDD
Other DBs
NCBI-ProteinID: BAN72879
LinkDB
Position
2724628..2727156
AA seq 842 aa
MAIPDHISVRGAYVNNLKHLNVDIPLNKLVAITGRSGSGKSSLAMGVLYAEGMRRYMSAL
STYTRRRLGQTSPAAADSVRHIPSAIALRQRPTVPGIRSTVGTATEALNVIRLMFSRLGS
PVCPNGHRVSPTLDIAKAMDLPNDGESGMGMITCPTCGVRFMAFAAEDFAFNSTGACPTC
GGTGQARTLAANRLIPDQTLTIRQGAVASWRLPGRNFMPFVAQAIGIDIDTPFQDLPKDQ
QEQVWHGERKKYAINIPSKTGKIFHMDHAQYENAFNAVEDSLATTKNERAIQRLNRFYEF
GICPTCHGSRFAPKLLSQHLVDQNIAQVSDMTLTQLAAFIPEIYHWLPADMQSLAHDIIQ
ELTQLLKPIMDLGLSYLTLSRAAASLSTGELQRIQLSRTLRTETTGVLYVLDEPSIGLHA
ANVSGLLEVMHGLVNQGNSLVVVDHNTAIIEAADQVIEIGPGAGVAGGRLIDQGSPEAIS
HDTHSLIAPFLTGAASLIVRPQAGEQEIKQTKQLQLTVTDRFNLHDLHVHFPVNCFSVVS
GFSGAGKSTLIFDALVPALSATADQPAPAFVRDLDRGGLRHVVAIDATPVGKNVRSTVAT
YTDILDHLRHLFASLPDAKAKHYTSSHFSYNVKAGACPTCGGTGVINLDIQYLPDMQQTC
PTCHGRRYNPEVLKIKWQQHSIADLLDLDVDSALTVLKDEPAISHTLQTLHDMGLGYLHL
GESTPTLSGGEAQRLKLVAHMGRSQKDTLFVFDEPSVGLHPLDVQTLIAVFQRLLKTGAT
VIAIEHDLDVIANADYVLDLGPKGGAEGGRIMAADTPQAIAKQGKGETAPYLAAHLAAFH
VK
NT seq 2529 nt   +upstreamnt  +downstreamnt
atggcaattcccgatcatatcagtgttcgcggcgcttacgttaacaacttgaagcatctc
aatgttgatattccgcttaacaaactggtggcgatcactggtcggtctggttccggtaaa
agttcattagccatgggcgtgttatacgctgaaggtatgcgccgctacatgagtgctttg
tccacctacacccgccggcgccttggccaaacaagtcctgctgctgctgactcagtacgc
cacattcctagtgccatcgctttgcggcagcggccaaccgttccaggcatccgctcaact
gtcggtacggccacagaagcgctcaacgtcattcgcctcatgttttcccgtctcggctcg
ccggtttgtcctaatggtcaccgcgtgtcgccaactctcgatattgccaaggcaatggat
ctgcccaatgacggtgaaagtggtatgggcatgatcacttgtccgacctgtggcgtccgt
ttcatggcttttgctgctgaagatttcgccttcaattcaactggcgcctgcccgacatgc
ggcggtactggtcaagcgcgcacactggccgccaaccggctcatccctgatcaaacactg
acaatccgtcaaggtgccgtggcctcgtggcgcttgcccggtcgcaattttatgcctttt
gtcgcacaagcaatcggcattgatattgatacgcctttccaggacctgccaaaagatcag
caagaacaggtttggcacggtgaacgtaaaaaatacgccatcaatatccccagcaaaacc
ggcaaaatttttcatatggaccatgcacagtacgagaatgccttcaatgcggtcgaagat
tctttagcgacgaccaaaaatgaacgcgccattcagcggctgaatcgcttctatgagttt
ggcatctgcccgacctgccatggcagccgatttgccccgaaattattgagccagcaccta
gtggatcaaaacattgctcaggttagtgatatgactttaacgcaattagccgcgttcatt
cccgaaatctatcactggttgccagcagatatgcagtcactggcgcacgatattatccaa
gaactgacgcaattgcttaagcccatcatggaccttggcctcagttacctgaccctgagt
cgagccgcggcttccttatcgactggtgaattgcaacgcattcagctcagtcgcacgctt
cggactgaaacgaccggcgtcctttacgtccttgatgaaccgtccatcggcctgcatgct
gcaaacgtttctggattgctagaagtcatgcacggtttggtcaatcaaggcaactcgctg
gtcgttgtggatcacaacaccgccatcattgaggcagccgatcaagtgattgagattggt
cccggtgcaggcgttgctggcggccgactcattgatcaaggcagccctgaagcgatcagc
catgatacccattcgttgattgcaccttttttaaccggagcggcttccttgattgttcgc
ccgcaagctggtgaacaagaaattaagcaaaccaaacaactgcaattaaccgtaactgat
cgatttaaccttcatgacctgcatgtccattttccagttaactgcttctcagtggtatcc
ggcttttctggtgctggcaagtcaactttgatttttgacgccctagtaccagcgctgtca
gcaactgctgaccaaccagctccagcatttgttcgtgatcttgaccgcggcggcctgcgc
catgtagttgcgattgatgccacgccggtcggtaaaaatgtccgctcaaccgtcgccacc
tacacagacattctcgaccatctgcgacaccttttcgccagtttgcctgatgccaaagcc
aagcactatacgagtagccatttctcttacaacgtcaaagccggcgcgtgcccgacatgc
ggcggtaccggcgtcattaacttagatatccagtatctgcctgacatgcagcaaacttgc
ccgacttgtcacggccgtcgctacaaccccgaggttctgaaaatcaaatggcagcagcac
agcatcgccgacttgctagatctggacgtggactccgccttgaccgttctgaaagacgag
cccgctatttctcacacattgcaaaccctgcatgacatgggcctcggttatttgcattta
ggtgaaagtaccccgacgctgtctggcggtgaagcgcagcgcctgaagctagttgcccac
atgggacgctcccaaaaggacacgctttttgtcttcgatgaaccatcggtaggtctacac
cccttggatgttcaaaccttgatcgctgtttttcaacggttgctcaaaaccggtgcaacg
gttattgccatcgaacacgatttagacgtcatcgctaacgctgattatgtcttggatctc
ggaccaaaaggcggtgcagaaggtggccgcatcatggctgctgacacaccgcaagcaatc
gccaaacaagggaaaggtgaaactgccccttacttggcggcccatctggcggcctttcac
gttaagtag

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