Lentilactobacillus parabuchneri: FAM21731_01698
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Entry
FAM21731_01698 CDS
T04617
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAM21731_01698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpar03021
]
FAM21731_01698
03400 DNA repair and recombination proteins [BR:
lpar03400
]
FAM21731_01698
Enzymes [BR:
lpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAM21731_01698
Transcription machinery [BR:
lpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAM21731_01698
DNA repair and recombination proteins [BR:
lpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAM21731_01698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
APR07861
UniProt:
A0A1X1FDW8
LinkDB
All DBs
Position
1775781..1779389
Genome browser
AA seq
1202 aa
AA seq
DB search
MAGHLVKYGKHRTRRSYARIKEVLDLPNLIEIQTNSYNWFLHEGLKETFDGIMPIDDFQG
KLSLEFVDYQLLTPKYTVDEAREHEANYSAPLHIKLKLTNHETGEIKTQDVFFGDFPLMT
DQGTFIINGAERVIVSQLVRSPGVYYHADKDKNGRDSFGTTVIPNRGAWLEFETDAKNIA
YVRIDRTRKIPLTELIRALGFGSDSEIIDILGDNDSLGLTLEKDVHKDTDDSRVEESLKD
IYERLRPGEPKTADSSRSLLTARFFDPKRYDMAPVGRYKTNKKLSLKNRLLGLTLAETLA
DPDTGEVIAQKGTVVSKDVMKDLAPYLDNDDFKAYTFNPSDEAVVTKPMTVQIVKVQSVN
DPDRVVPIIGNDNIPLSFKHITPADVIASMNYFFNLQEGIGSIDDIDHLGNRRIRSVGEL
LQNQFRIGLSRMERVVRERMSIQDTSTVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLSSYA
RVNKYGFIETPYRRVDWTTHKVTDRIDYLTADEEDNFVIAQANSPLNDDGSFVNKIVMAR
HQSNNIEISIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPHA
PLVGTGIEYKAAHDSGVALICKNPGTVEYVDAREIRIRREDKTLDKYKLMKFRRSNGGKN
YNQRPIVKVGDHVDADEILADGPSMEGGELALGQNPVVAFMTWQGYNFEDAIAISERLVK
DDVYTSIHIEEYESETRDTKLGPEEMTREIPNVGEDALKNLDEDGTVRIGAEVHDGDILV
GKVTPKGVTELSAEERLLHAIFGEKSREVRDTSLRVPHGGGGIVQDVKVFTRENGDELSP
GVNKMVRVYIAQKRKIQVGDKMSGRHGNKGTVSVVIPEEDMPFLPDGTPVDIMLSPMGVP
SRMNIGQVLELHLGMAARKLGIHVATPVFDGARDSDIWDAVKEAGMPSDGKYILYDGRTG
EPFDKKIAVGVMHYLKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMK
VLDSSHKEIELRDLDDDDDVVNVDALSKLADKKKEQEDQANKQADEKVEAPSKSTNANNS
ND
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatttagttaaatatggaaaacaccgtacccgacgaagttatgcacgaatt
aaagaagtgcttgatttaccgaacctgattgaaatccagactaattcttacaactggttt
ttacatgagggacttaaagaaaccttcgacggcattatgccaatcgacgatttccagggc
aagctttctttagagtttgttgattatcaattgttaacaccaaagtacactgtcgacgag
gcacgtgaacacgaggcgaattattcggcgccacttcacattaagctgaaattaaccaat
cacgagactggcgaaatcaagactcaagatgtattctttggcgattttccattaatgact
gatcaagggacattcattattaatggtgctgaacgggttattgtttcacaattggttcgt
tcacccggcgtttattaccacgcagacaaagataagaatggccgtgattcattcggtaca
actgtgattcctaacagaggtgcctggcttgaatttgaaaccgacgcaaaaaatattgcg
tatgttcgaattgatcgaactagaaaaattcctttaaccgaattgattcgtgccctcgga
tttggcagtgattctgaaatcattgacatcttgggcgacaacgacagtttgggtctgacc
ttggaaaaggatgttcataaggataccgatgattctcgtgttgaagagtcattaaaagat
atttatgagcgactacgtccaggtgagcctaagactgctgattcatcaagaagcttgtta
actgcacgcttctttgatccaaagcgttatgacatggcaccagttggccgttataagacc
aataaaaagctaagtttgaagaaccgtttattagggttgacgttagctgagactttagct
gaccctgatacgggtgaagtcattgcacaaaagggcacggttgtgtctaaagatgtgatg
aaagatctcgcaccttaccttgataacgatgattttaaagcttatacctttaacccatca
gatgaagctgttgtgacgaagccaatgaccgttcaaatcgtgaaggttcaatccgttaac
gatcctgatcgggttgttcctattatcggaaacgacaatattccattgagcttcaaacac
attacacctgctgacgtgattgcttcgatgaactacttctttaaccttcaagaaggcatt
ggttcaatcgacgatatcgatcacttgggtaaccgtcgaattcgttcagttggtgaattg
ctgcagaaccaattccgaattggtttatcacggatggaacgagttgttcgtgaaagaatg
tcaattcaggatacttctacagtgacacctcaacaattgattaacattcgaccagttgtt
gcatcaatcaaagagttctttggttcatcacagctgtcacagttcatggatcagaccaac
ccgcttggtgaattaacgcataagcgtcgtttgtctgcccttggacctggtggtttaacc
cgtgaccgtgccggatatgaagtccgagatgttcactacacccactatggccggatgtgt
ccaattgaaacacctgaaggtcctaacattggattgattaacagtttgtccagttatgcg
cgggttaacaagtatggtttcatcgaaacaccataccgtcgtgttgattggacaacccac
aaggttaccgatcggatcgactatttgactgctgacgaagaagataactttgttattgcg
caggctaactcaccattgaacgatgatggttcgtttgttaataagatcgttatggcgcgt
catcaatcaaacaacatcgaaattagtatcgacaaagttgactacatggacgtttctcct
aagcaagtagttgctgttgccactgcatgtattcctttcttggaaaacgatgactccaac
cgtgccctgatgggtgccaacatgcagcgtcaggcggttcctttgattgatcctcatgca
ccacttgttggtactggtatcgaatacaaggctgcccatgattccggtgttgcactcatt
tgtaagaacccgggaactgttgaatacgtcgatgcacgtgaaatccgcattcgtcgtgaa
gacaagacccttgataaatataaattaatgaagttccgtcgttcaaatggcggtaaaaac
tacaaccaacgccctatcgttaaggttggcgatcacgttgatgccgacgaaatcttagct
gatggtccatcaatggaaggcggagaattggcacttggtcaaaaccccgttgttgcattt
atgacttggcaaggttacaacttcgaagatgccatcgcaattagcgaacggttggttaaa
gacgacgtctacacttcaattcacattgaagagtacgaatcagaaacccgtgataccaaa
ttaggacctgaggaaatgactcgggaaattcctaatgttggtgaagatgctttgaagaac
cttgatgaagacgggaccgtacggattggtgccgaagttcatgatggcgacattttagtt
ggtaaagtaacgcctaagggtgtcactgaattatcagctgaggaacgtttgctgcatgct
atctttggtgaaaaatcacgtgaagtccgtgatacatcattgagagttcctcatggtggt
ggcggtattgtccaagatgttaaggtcttcactcgtgaaaacggtgatgaactttcacct
ggtgttaacaagatggttcgtgtttacatcgcccagaagcgtaagattcaagttggtgat
aagatgtcaggccgtcatggtaacaagggtaccgtttccgttgtgattccagaagaagac
atgccattcttacctgatggcacaccagtggacattatgttgagtcccatgggtgttcca
tctcgtatgaacatcggacaagttctggaacttcatttgggaatggctgctcgtaagctg
ggaatccacgttgcaactcctgttttcgatggtgcccgagattcagatatttgggatgct
gttaaagaagccggaatgccttcagatggtaaatacatcctgtatgatggccgtaccggt
gaaccatttgacaagaagattgccgttggtgtcatgcattacctcaagcttgcccacatg
gttgatgataaaattcatgcacgttcaattggaccttactcattggttacacaacaacca
cttggtggtaaagcacagtttggtggccagcgttttggtgaaatggaagtttgggcactt
gaagcatatggtgctgcttacacacttcaagaaattttgacttacaaatccgatgacgtt
gttggtcgtgtcaagacttacgaagccattgtgaagggtgagccaattccaaagccgggt
gttcctgaatcattccgtgtgcttgttaaagaattgcaatcattaggccttgatatgaaa
gttcttgactccagtcataaagaaatcgaattgcgagatcttgatgatgacgatgacgtg
gttaacgttgatgcattaagcaagttagccgacaagaagaaggaacaagaagaccaagcc
aacaaacaggcagacgagaaggttgaagcaccatccaaatcaaccaacgctaacaatagt
aatgactag
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