Lentilactobacillus parabuchneri: FAM21731_01699
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Entry
FAM21731_01699 CDS
T04617
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAM21731_01699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpar03021
]
FAM21731_01699
03400 DNA repair and recombination proteins [BR:
lpar03400
]
FAM21731_01699
Enzymes [BR:
lpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAM21731_01699
Transcription machinery [BR:
lpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAM21731_01699
DNA repair and recombination proteins [BR:
lpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAM21731_01699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APR07862
UniProt:
A0A1X1FDK8
LinkDB
All DBs
Position
1779407..1783069
Genome browser
AA seq
1220 aa
AA seq
DB search
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTEPGNTPMEKKQLLSEREYREKKQEYGPRFSAQIGAEAIKTLLD
DVDVNKEVIELKDELKNATGQKRTRAVRRLDILEAFVQSGNELSWMVMDAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPHLRMNQMGLPVP
MAMELFKPFIMKELVGRNLASNIKNAKRKIERQDDDVFSVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKSMRLHPLVCEAYNADFDGDQMAIHVPLSDEAQAESRLLMLAAGHIL
APKDGKPVVTPSQDMVIGNYYLTMEEAGREGEGMIFNSPEEAQLAYKNGIVHWHTRVGIK
ASAYPKKTFTKEQLDKILVTSVGKIIFNTILPEDFPYINEPTETNLNNFVDDKYFLEAGE
DIHEHLKNAALVPPFKKGYLSDIIAEVYKRYKVTETSFFLDRMKDLGYNESTKSGLTVGI
TDITQLPEKQELIDDAHKKVDMVTKQFRRGLITDHERYERVIGIWNDAKDEIQKRLMAEQ
DPQNPIYMMSDSGARGNISNFTQLAGMRGLMAAPNGEIMELPITSNFREGLTVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLTISAITEGNEMIEPLY
DRIVGRYAHKTVKNPKTGDVIVAANTMITEGQAQQIDDLGIKEVTIRSAFTCNTIHGVCE
KCYGRNLATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNADITQGLPRVQEI
FEARNPKGKAEISEVTGTIESIEENPAERTKEITVKGESDTRTYTVPITAQMKVAEGDFI
HRGSALNQGSVDPKELLKVRDVLSTENYLLHEVQKVYRMQGVEVSDKHVEIMIRQMLRKV
RIMDPGDTDVLPGTLMDINDFKNSNADTVVTGGIPATARPVLLGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMPDYRGIKPEEIGSSSTDGVYS
ISELEEKMKAEDASKSKTTK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatgttaataaattcgaaagtatgcagattggactagcctctcctgataagatt
cgtagctggtcatatggtgaagttaaaaagcctgaaaccattaactaccgaactttaaaa
ccagaaaaagatggtttgtttgatgagcgaatttttggtcctaccaaggactgggaatgt
gcctgtggaaaatacaagcggatccgttacaagggaatcgtttgtgaccgctgcggtgtt
gaagtgacgcgttcaaaggttcgtcgtgaacgaatgggccatattgaattagcagcgcca
gttacccacatctggtatttcaagggaatcccaagccgaatgggtcttgtattggatatg
agcccccgtgcgcttgaagaaatcatttacttcgcttcatacgttgtcaccgaaccaggt
aatacacctatggaaaagaagcagttgctttcagaacgtgaataccgtgaaaagaagcag
gaatatggtcctcgtttctccgcacaaattggtgctgaagcaattaagaccttgttggat
gatgttgatgtcaacaaggaagtcattgaattaaaggacgaattaaagaacgcaacgggt
caaaaacggacccgtgccgttcgtcgtttggatatcttggaagcatttgttcagtccgga
aatgaactttcatggatggtaatggatgcaattccagttattccacctgacttacgtcca
atggttcaacttgaaggtggccgttttgccacttccgatttgaacgatttgtaccgtcga
gtaatcaaccgtaacaatcgtttgaagcggttactcgatttgaacgcgcctggcattatt
gttcaaaacgaaaagcggatgcttcaagaagccgttgatgccttgatcgataatggccgt
cgtggccgtccggttgcaggtcctggtaaccgtccactgaaatcactttctcacatgctt
aaaggtaagcagggacgattccgtcagaacttgcttggtaagcgtgtcgattattcaggt
cgttcagttattgatgttgggcctcatcttcggatgaaccaaatgggattgccagttcca
atggccatggaattattcaagccatttatcatgaaagaattggttggtcgcaatttggct
tccaacattaagaacgccaagcgtaaaattgaacgtcaagacgacgatgtcttcagcgtt
ttggaagatgttattaaggaacacccagttctgttgaaccgggctcctacacttcaccgt
ttgggaatccaggccttcgaacctgttttggttagtggtaagtccatgcgtcttcatccg
ttggtttgtgaagcttacaacgccgattttgatggggaccaaatggccattcacgttcct
ttatctgacgaagcacaagctgagtcacgtttgctgatgttggctgctggccatatcctt
gcacctaaggatggaaaaccagttgtaacaccatctcaggatatggttattggtaactat
tacctgaccatggaagaagcaggccgtgaaggtgaaggcatgatctttaattcacctgaa
gaagcccaattagcttataagaatggaatcgttcattggcatacgcgagttggaattaag
gcatctgcttatcctaagaagacgtttactaaggaacagttggataaaattttggtaact
tctgttggtaagatcatcttcaacacgattttgccagaggacttcccatatattaacgaa
ccaactgaaactaatttgaacaattttgttgacgacaagtacttccttgaagctggtgaa
gatatccatgagcatcttaaaaatgctgcgttggttccaccattcaagaaggggtattta
agtgacatcattgccgaagtttacaagcgctataaggtaactgaaacctcattcttcctt
gaccggatgaaagatcttggatacaacgaatcaactaagtccggcttaactgttgggatt
actgatatcacccaattgcctgaaaagcaggaacttattgacgatgcccataagaaagtg
gacatggtgacaaaacagttccgtcgtggtttgattaccgatcatgaacgttatgaacgt
gttattggtatctggaatgacgccaaggatgaaattcagaagcgtttgatggctgaacaa
gatccacaaaaccctatctacatgatgagtgactccggtgcccgtggtaacatttcaaac
tttactcagcttgccggtatgcgtggattgatggcggctcctaacggtgaaatcatggaa
ttgccaatcacttcaaacttccgtgaaggtttgactgtgttggaaatgtttatttcaacc
catggcgcccgtaaaggtatgactgatactgcccttaagactgccaactcaggatacttg
actcgtcgtttggttgatgttgctcaagacgtcattgtccgtgaaaaagactgtggaacc
gatcgtggccttacaatcagtgcaatcactgaaggtaatgaaatgattgaaccactctac
gaccgaatcgttggtcgttatgcgcataagacggttaagaatccgaagactggtgacgtc
attgtcgctgccaatacaatgattactgaaggccaagctcaacaaatcgatgatcttgga
attaaggaagtaaccattcgttcagcatttacttgcaacacgattcatggtgtctgcgaa
aaatgttatggtcgtaacttagctaccggagacgaagttgaagttggagaagctgttggt
actgttgccgctcaatcaatcggtgaacccggtacccagttgaccatgcgtaacttccat
actggtggtgttgctggtaacgccgatattacccaaggacttcctcgtgttcaagaaatt
tttgaagcacgtaatccaaaaggtaaagctgagatcagtgaagttactgggacaattgaa
tcaatcgaagaaaaccctgctgaaagaaccaaggaaatcactgttaaaggtgaatctgat
actcggacttacacggttccaattaccgctcaaatgaaagttgctgaaggcgacttcatc
caccgtggttctgcattgaaccaaggttctgttgaccctaaggaattgttaaaagttcgt
gacgttctttcaactgaaaactatctcttgcatgaagttcaaaaagtttaccgtatgcaa
ggtgttgaagtgtctgataagcatgtggaaatcatgattcgtcaaatgcttcgtaaggtc
cgcatcatggatcctggcgacactgatgttttacctggtactttaatggacatcaatgac
ttcaagaatagtaacgcagatacagttgtaactggtggaatcccagcgacagctcgacct
gtcttgcttggaattaccaaagctgcccttgagaccaatagtttcttgtcagccgcatca
ttccaagaaacaactcgtgtgcttactgatgctgctattcgtggtaaaaatgacccactt
gttggtttgaaggaaaatgttatcattggtaaattaattcctgctggtactggaatgcca
gattaccgtggaattaagcctgaagaaattggtagctcatcaactgatggtgtttactca
attagcgagcttgaagagaaaatgaaagctgaagatgctagtaagagcaaaacaacgaag
taa
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