Secundilactobacillus paracollinoides: AYR62_03390
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Entry
AYR62_03390 CDS
T04675
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYR62_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_03390
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR62_03390
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AYR62_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
AAA_23
AAA_14
AAA_33
Viral_helicase1
APS_kinase
SLFN-g3_helicase
AAA_18
AAA_21
DnaJ_CXXCXGXG
ATPase_2
NACHT
T2SSE
cobW
DUF87
Septin
RNA_helicase
AAA_15
AAA_19
MMR_HSR1
FtsK_SpoIIIE
NB-ARC
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ANZ63239
UniProt:
A0A1B2IZL2
LinkDB
All DBs
Position
803286..806138
Genome browser
AA seq
950 aa
AA seq
DB search
MANDYIEIHGARAHNLKNIDVKIPKNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVQSLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTEITSQTVEQMVDKVLSLPERTKLQILSPIVREKKGQHKKVFDKIKREGFVRVR
IDGEVHDVDEELDLNKNQMHSIDIVVDRIVVKDGIRSRLFDSFEAALRLSGGYAVADLID
GEPILFSEHYACPICGFTVGELEPRLFSFNAPFGACPDCDGLGMKLEIDPDLIIPDDTKT
LSEGAVAPWNPSSSKYYPDMLAQACAQADIDMDTPWKDLSKDDQHFVLYGSSKVMHFELN
SDFGGVRETDTPFEGVINNVDRRYHNGTDFTQGQMQQYFRELTCQTCHGYRLNRKALAVK
IGGKHIGEVSDFAIGEELPFFDQLQFSDQDQTIAQPILKEIRDRLTFLENVGLDYLTLSR
AARTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLI
VVEHDEDTMKAADYLIDIGPGAGEHGGEVMAAGTPKQVIRTKKSLTGQYLSGKKFIPVPE
TRGKGNGKKITIKGAAENNLKDIDVDFPLGEFVVVTGVSGSGKSTLVNTILKRVLAQKIN
RNSEKPGKYKSVSGIKNIEKVINIDQSPIGRTPRSNPATYTGVFNDIRGLFAQTSEAKLR
GYQQGRFSFNIKGGRCEACHGDGILKIEMNFLPDVYVPCEVCHGKRYNSETLEVEYKGKN
IAEVLDMTVDQALEFFSAIPKITRKLQTIHDVGLGYVSLGQSATTLSGGEAQRMKLASEL
QKKANGQNFYILDEPTTGLHVDDIKRLLDVLHRLVDNGNTVLIIEHNLDVIKTADHLIDL
GPEGGDGGGQVVATGTPEEIAAAPGSYTGQYLGPILERDKERAKSVKQGA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacgattatattgagattcatggtgcccgagcgcacaatttgaaaaacattgat
gttaaaattcccaaaaacaaactagtcgttgtgacgggactatcagggtcaggcaagagt
tccttggcctttgatacgttgtatgccgagggacagcgccggtatgtccaatcattgtct
gcctatgcgcggcaattcttgggtcaaatggataagcctgatgttgactcgatcgacggg
ttgtcaccggcgatttctattgaccaaaaaacaacgtcaaagaacccccggtcaaccgtg
ggaacggtgactgaaatcaatgactatttgcggttgctgtgggctcgggtcgggacccca
atttgtccaaacgacgggaccgaaattacgagtcagacagtggaacagatggtcgataaa
gttctctcgttgcctgaacggacaaagttgcagattctgtcacccatcgtgcgtgaaaag
aagggtcagcacaagaaagtcttcgataagatcaagcgtgaagggtttgtacgcgttcga
atcgatggtgaagtccatgatgttgatgaggagcttgacctgaataagaatcagatgcat
tcaattgatatcgtggttgaccggatcgttgttaaggacggtattcggtcacgacttttc
gattcctttgaagcagcattacgattaagcggcggatacgctgtcgctgatttaatcgat
ggcgagcccattttattttcagaacactacgcttgtccaatttgcggctttactgttggt
gaattggaaccgcgcctgttctcgtttaacgcgccatttggtgcctgcccagactgtgat
gggctggggatgaaactggaaatcgatcctgacctgattattccagacgatacgaagacg
ttgagtgaaggggccgttgcgccttggaacccatccagctctaagtattatcctgatatg
ttagctcaggcgtgtgcccaagctgatatcgacatggatacgccatggaaggacttgtcc
aaggatgaccagcactttgtgttatacggctcatcaaaggtcatgcattttgaattgaac
agtgatttcggtggtgttcgggagaccgataccccgtttgaaggtgtcattaacaacgtc
gaccgtcgttaccacaatggaaccgacttcactcaaggacagatgcagcaatatttccgt
gagttaacctgtcaaacgtgtcacggctaccggttaaaccggaaggcgctggcggttaaa
attggcggcaagcacattggtgaagtttctgactttgccattggagaagaactgccattc
tttgaccaactgcagtttagtgatcaggatcagaccatcgcacaaccgatcttgaaagaa
attcgtgaccggttaaccttcttggaaaacgttgggttggattatttgacgttgagtcgg
gcagcgcgaacgctgtctggtggtgaggcgcaacgaattcggttggccactcaaatcggg
tcaaacctttctggggtgctctacattctggatgaaccgtcgattgggttacatcaacgt
gataatgaccgattgattgcttcattgaagaagatgcgtgaccttggcaataccctaatt
gtcgttgaacatgatgaagacaccatgaaggccgccgattatctgatcgacattggccct
ggcgccggtgagcacggtggtgaagtgatggctgctggcacgcctaaacaggtgattcga
actaagaaatcacttactggtcaatatttatccggaaagaaatttattccggttccggag
acccggggcaaaggcaacggtaagaagatcacgatcaagggcgcagcggaaaataacctc
aaagacattgacgttgattttccactgggtgaatttgtggtggtcaccggggtttcaggc
tctggtaagtcaacgctggtgaacaccattctaaaacgggtgctggcacaaaaaatcaat
cgtaactccgagaaaccggggaagtataagtcggtttctgggatcaagaatattgaaaaa
gtgattaacattgaccaaagtccaattggtcggacaccacgcagtaacccagccacttac
acgggtgtgtttaacgacattcgcggactgtttgcgcaaacgagcgaggccaagctacgt
ggctatcagcaaggccggttcagttttaacatcaagggtggccgttgtgaagcctgtcat
ggcgatggtatcttgaaaatcgaaatgaacttcttgcctgacgtgtacgtgccgtgtgaa
gtttgtcatggtaaacgctataattctgaaaccctagaagtggaatataagggtaagaac
attgccgaagtccttgatatgacagtggatcaagcattggagttctttagtgcaatccca
aagatcactcggaagttgcagacgattcatgatgttgggttaggctatgtgtcactcggt
caatcagcgacaacgttgtctggtggtgaagcgcaacggatgaagctggcgtctgaattg
cagaagaaggccaatggccaaaacttctacattctagatgaaccaaccactggtctgcac
gtggatgatatcaaacgcttgttggatgtcttgcatcgcttagtcgataacgggaacacg
gtgttgatcatcgaacataacctcgacgtcatcaagacggctgatcacctgatcgacctt
ggaccagagggcggcgatggtggcggccaagtggtcgcaacgggaaccccagaagagatt
gcagcagctccgggaagttatacggggcagtatcttggaccgattttggaaagggataag
gaaagggcaaagagcgtgaagcagggcgcttaa
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