Lolium perenne (perennial ryegrass): 127307645
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Entry
127307645 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP205
KO
K14310
nuclear pore complex protein Nup205
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127307645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127307645
03036 Chromosome and associated proteins [BR:
lper03036
]
127307645
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127307645
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127307645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
127307645
NCBI-ProteinID:
XP_051194349
LinkDB
All DBs
Position
6:complement(71296816..71319747)
Genome browser
AA seq
1852 aa
AA seq
DB search
MAPPPPRELLAVVEAALLSPAPPSPAQRVELLHALRDAAPAFRALLSYPGPKASDRTQVE
AKEVRLPDMPPITLDDTDVQTALKLSDELNLNEIECVRLLVSANREWVLYGREPLEIYRL
AAGLWYMERRDLITSLYILLRSVVLDQGLDADLMYEIQSQMEALFSDGLRQRIITLVKEL
NREEPSGIGRPSSESYVLDFRGALVERRAIVSRERLSLSHCLALSALIKLMGPKEVKDTF
SILKDCAAEVNENTSVELQITYGILFSLVVTFVSDALSTSHEKASLPSDSSFRREFHELV
TRTCNNTTVEGFVGIVRLAWTVLLMLTQDQNSARDSVINASSGVVADIWSCLDIICRLNA
FEFLRERVMQTAAYQNDDDDIVYMYTGYAHKLMMCFLSHPTCRDKIKEIKEKAMNALSPY
ALPRDHREDLNISGEQTGQPTKQPFVSLLELVGEIYQKEPELVHGNEELWTFVVYAGEDH
TNTQTLVAFLGLLSTLASSEVGAAKVYELLQGKVYRSVGWNTLFDCLSIYEEKFKKSLQS
ATSMLPDFPEGDAQALVAYLAVLQKVVENGNPSERRKWFPDIEPLFKLLSYENVPPYLKG
ALRNSITAFVKVSPQLKDAVWSYLEQYDLPVVTVSPGQHTATQVYDMRFELNEVEARRES
YPSTISFLNLVNALIAEERNISDKGRRFMGIFKFVYEDVFGPFPQRAYGDPREKWELALA
CLEHFRLVLRMYDIKDDDIYAAFSTSGPSTSNASIEKQLPVLELVKDFMCGKVAFRNIMN
IVLVGVDTLINERTTQTYGILLEKTVHLSLEIFILVMERDLVLADVFRPLYQPLDVVLSQ
NHRQIIALLEFVRYDYLPEIQQCSIKIMGILSSRIVGLVQLLLKDNVSKSVIEDYAACLE
YRFDDFQVIENTKDDVGVLILQLLIDNICRPAPNITHLLLRFDVNGPIERTVLKPKSHYS
CLKIILDNLEKVTKPDINALLHEFSFQLLYELCLDPLTCGPVMDLLSTTKYQFFSKHVET
IAVSPLPKRNINQALRISTLHQRAWLLKMLALAVHVSDISSSVYREAVLAILNDTFGHCT
ENMKNASMFQSPGTPINTSNGPMNRNKVLELLEVVQFRCPDTSMKYPQLLSNLRVESKIE
EILRNSATSEFGGVYYFSERGDRLIDLDAFHQKLIQMSQELHTQLSESEKGELKESFHHM
LKWAWRYNKNLEEQAAQLHMLTSWSQTVEVAVSRRMSLLEDRSQLLFELLDASLGATSSP
DCSVKMAYILTNVALTCMAKLRDERFVCPTGADSDAVTCLDIISAKQLSNAACNSLLFKL
IMAITRNESSETLRRRQYALLLSYFQYCGSILDSDVPPSVIRFLLLEEQEGDDDELTLQK
VLKEQSELARANFAIIRKDAQAVIDLVTKDAIHGSEAGKAISFYVLDSLISIDHDKYFLN
QLQSRGILRSCLSDVSNYFSKDMSFSSEFSQRFCTADAQFSLLLRISHHYGKYGSQILLS
MGALQNLSSCNLLGYQKKGSSRLNSNVVKERAVEIDKKRSLTAPVLRIVTSFTSLVDSAD
FLEVKNKIVREIVDFAKQNQSIFNSILRENISGANAFTLERLYMVVSILSKVWAYEENDE
CSYVQDLFSMMHSLFSLDFGSLNLIQSPNMIENQKSELVLFGLCFGLISYLYFLATKKNM
RFQISVGDNSEHGQQQPTLQMVSDLLNSVTLALERVGEEKYLLLNKVRDLNELSRKEVDE
IIKVCMKQDCISPNDNIRKRRYIAMIDLCCMAGNRDQLITLLLQVAECAITILLVHFHDE
ACAEDLSSFSDELLPILERLENLKEDKVGRNLKLFHRSVSTLKETTVRSMAM
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccacccccgcgcgagctcctggccgtcgtcgaggccgcgttactcagcccc
gcgccgccgtcgccagcgcagcgcgtggagcttctccacgccctccgcgatgccgccccc
gccttccgggcgctcctctcgtacccggggcccaaggcgtccgatcgaactcaggtggag
gcaaaggaggttcggctcccggacatgccgccaatcacgcttgatgacaccgacgtgcag
actgcccttaagttgagtgacgaactcaatcttaatgaaatcgagtgtgttcggttgcta
gtctctgccaacagagagtgggttctatatggtcgagagccactggaaatatataggctt
gcagctggcctttggtacatggagaggagagatcttataacttctctgtacattctgttg
cggtctgttgtactcgaccaagggcttgatgctgatctgatgtatgaaatccaaagtcaa
atggaggctctttttagcgatggtctccggcagcggataatcacccttgtaaaggagctt
aatcgggaagaaccgtctggcattggtcgaccaagctccgagagttatgtgcttgatttc
agaggggctcttgttgagaggcgtgccattgtctcccgagagagattaagtttgagtcac
tgccttgctctttctgcacttatcaaactgatgggtcccaaggaggttaaggatacattt
tcgatattaaaagactgtgcagctgaagtaaatgaaaatactagtgttgagcttcagatc
acctatggcattctgttctctcttgtagtgacttttgtttctgatgccctaagtacttcc
catgagaaagcatctttgccatctgattcctcgttcagacgtgaatttcatgagctagtg
acgaggacatgtaacaataccaccgtcgaaggatttgttggtattgtgcgccttgcatgg
actgttcttttgatgttaacacaagatcaaaatagtgcaagagactcagtaattaatgct
tcctccggagttgtggctgatatttggtcatgtctggatattatttgtcgcctgaatgct
tttgaatttttacgggagcgtgttatgcaaacagctgcttaccagaatgatgacgatgac
attgtttacatgtacactggctatgcgcacaagttgatgatgtgctttctctcccatcca
acttgtagagataagataaaggaaatcaaggaaaaagcaatgaatgctctcagtccatat
gctctaccacgggatcatagagaagatcttaatataagcggagaacagactggtcagcct
actaagcagccttttgtatccctactggaactagttggagaaatctaccagaaagagcct
gagctagtgcatggaaacgaggaactgtggacctttgtcgtatatgcaggtgaagatcac
accaatacacaaactcttgtggccttccttggacttcttagtactttggcttccagtgaa
gttggtgctgccaaagtctatgaattgctccagggaaaagtttaccgctcagttggatgg
aacactttgtttgattgcttatctatttatgaagaaaagtttaagaaatcccttcaatct
gccacaagcatgttgcctgattttccagagggggatgcacaggcacttgttgcgtattta
gctgtccttcagaaggtggtggaaaatggaaatccatctgaaagaaggaaatggttccct
gacattgaacctttgtttaagcttctaagctatgaaaatgttcccccatatttgaagggg
gctttgcgaaactcaatcactgcttttgtcaaagtttcaccccagttgaaagatgctgtt
tggagttatcttgaacaatatgatcttccagtggttacggtttcacctgggcagcacaca
gcaacacaggtctatgacatgaggtttgagttgaatgaagttgaagcaaggagggagagt
tatccgtcaaccatatcatttctcaacttggtcaatgctctcattgcagaagaaagaaac
ataagtgacaaaggccgtaggttcatgggtatctttaagtttgtatatgaggatgtcttt
gggccttttccccaaagagcctatggtgaccctcgggaaaagtgggaattagcacttgcc
tgcttggagcattttcgcctggttttgcgcatgtacgacataaaggatgatgatatttat
gctgcttttagcacgtctggaccttcaacatcgaatgcgtcaattgagaaacagctccct
gtgctagaactagtcaaagatttcatgtgtggcaaggttgctttccgcaatattatgaac
atcgtattagtgggtgttgacactcttattaatgagcgaactacccaaacttacgggatt
cttctggagaaaactgtccatctttcacttgaaatatttattcttgtaatggagagagat
ctggttcttgctgatgttttccgtccactctaccagcccttggatgttgtattatctcaa
aatcatagacagattatagctttgctggagtttgtccgatatgattatcttcctgaaatt
caacagtgttcaataaaaatcatgggcatcttgagttctagaatagttgggcttgtacag
ttgcttctgaaagataatgtttctaaatctgtaatcgaggattatgctgcttgcttggag
taccgttttgatgatttccaggtcatagagaacacaaaagatgatgttggtgttctaata
ctacagctacttattgacaatatttgtcgtccagctcccaacattacacatttactctta
agatttgatgtcaatggacctatagaacgaactgttctaaaaccaaaatcacactacagt
tgcttgaagataatccttgacaatctcgaaaaagtgacaaaacctgatataaacgcctta
cttcacgagttcagttttcagcttctgtacgagctatgtcttgatcctttaacttgtgga
cctgtcatggatctcctgagtacaacgaagtatcagttcttttcgaagcatgtggaaacc
attgctgtttcaccacttcccaaaaggaacattaatcaagctcttcgcatcagcactctc
catcagagggcgtggttgctaaagatgctagctttggcagtacatgtatccgatatatca
tcatctgtgtatcgggaggctgttctggctattcttaatgacacttttggtcactgcact
gagaacatgaagaatgcaagcatgttccaatctcccggcactcccatcaacactagcaat
ggaccaatgaatagaaataaggttttggaattgcttgaagttgtacagttcagatgtcca
gacacttctatgaaatatcctcagttgctttcaaatttgagagttgagtcgaagattgaa
gagatcctaagaaattctgcaacatctgaatttggcggtgtatattatttttcggagaga
ggtgatcggctgattgatctggatgccttccatcaaaaacttatccagatgtcccaagaa
ctgcacacacagttgagcgagtctgagaaaggcgagctaaaggaatcattccatcatatg
ctgaaatgggcctggagatataacaaaaatcttgaagaacaggcagcccagcttcacatg
ttgactagctggtctcagactgttgaagttgctgtatcaagaaggatgtcattgcttgaa
gaccgttcacagttattgtttgagctccttgatgcttcattgggtgccacatcatctcca
gactgttcagtgaaaatggcgtatattttaaccaatgtagcattgacctgtatggctaaa
ctccgggatgaaagattcgtatgcccaactggtgcagattctgatgcagttacttgcctt
gacattatttcggcaaaacagctgtcaaatgcagcctgtaactcgttgttgttcaagctc
attatggcaataacccgaaatgaatcgtctgaaaccttgagaagacgccaatatgcatta
ctattgagttacttccaatattgtggcagcattctcgactctgatgttcctccatcagtt
attcgtttcttgctactcgaagaacaggagggagatgacgatgaactcactcttcaaaag
gttctgaaggaacaaagtgaattagcacgtgctaactttgctatcataaggaaggacgct
caagcagtcattgatttggttactaaggatgctatccatggaagcgaagctgggaaagca
atttcattttatgttcttgattcattaattagtattgaccatgacaagtatttcttaaac
cagcttcaaagtcgaggaattctcagatcctgtctaagtgatgttagcaactatttctca
aaggacatgtcattctcctcagagttttcacaacggttttgcactgctgatgctcagttt
tcgttacttctgagaatcagtcaccattatggcaaatatggctctcagattttattgtcc
atgggggctttacaaaatctttcatcatgcaacctcttgggttatcagaaaaagggaagt
tcaaggctaaactccaatgttgtgaaggaacgagctgtggaaattgacaagaagcgttca
cttactgcaccagtcctgcgaatagtcacatctttcacatcacttgtggactcagctgat
tttcttgaggtgaagaacaaaattgtacgtgagatagtggattttgccaagcaaaatcag
tcaatttttaatagcattttaagagagaacatatctggagctaatgccttcaccttggag
cggctttatatggtggtttctattctcagcaaggtatgggcatatgaggaaaatgatgaa
tgcagctatgtccaagatctattctcaatgatgcattctctttttagtcttgattttggg
tctctgaatctcattcaatcaccaaatatgattgagaaccagaagtcagagttggtatta
tttggtctctgctttggcctgatatcttacctatattttctggctacgaagaagaatatg
cggtttcaaatttcagtcggtgataacagcgaacatggtcagcagcaaccaactcttcaa
atggtttcagatcttctgaactctgtaacacttgctctcgagagagtaggtgaagaaaaa
tatttgttgttaaataaggttcgtgacttgaatgagttatctaggaaggaggtcgatgag
ataataaaagtatgcatgaagcaagattgcatctcgccgaacgataacatccgtaaaagg
aggtatattgcaatgatagatttgtgttgcatggctggcaaccgagaccaacttataaca
cttctactccaagtcgctgaatgtgccatcactattctcctcgttcattttcatgatgaa
gcttgtgcggaagatctgtcttcattttctgatgaactactccctatattggaaaggcta
gagaatctaaaagaggacaaggttggacgtaatctcaagttgttccacagatctgttagc
actctgaaagagacaactgtaagaagcatggccatgtga
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