Lolium perenne (perennial ryegrass): 127334496
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Entry
127334496 CDS
T08650
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lper04812
]
127334496
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
127334496
Cytoskeleton proteins [BR:
lper04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127334496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_2
AAA_16
TIP49
Mg_chelatase
AAA_14
AAA_33
AAA_22
AAA_24
AAA_28
AAA_7
IstB_IS21
nSTAND3
PhoH
RNA_helicase
ORC-CDC6-like
NPHP3_N
AAA_17
Parvo_NS1
TsaE
Motif
Other DBs
NCBI-GeneID:
127334496
NCBI-ProteinID:
XP_051216919
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Position
6:complement(133179987..133185348)
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AA seq
519 aa
AA seq
DB search
MANPLARLQVHLKLARDYALDGLYDTSIIIFDGVLAQINKHLTNLDDGFTRTKWMKCKQA
ISEEVEIVRQLDALMKSFKEAPGSGTMRSSSPPIRSNKSFLFQPLDEYPTSLPQTFDDPD
VWAPPKDRPTRRLTRGQSSAKKSSQDGAWSRGPSKTGTPSRRAKPNGSKSSSVVRSSTAS
SAGGRKGKSSSSKGDSASSDAEEGKSKKSRYDGPDGDLVAMLERDVLDSTPGVRWDDVAG
LSEAKRLLDEAVVLPLLMPKYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECRTTFFNV
SSATLASKWRGEGVRMVRCLFELARAHAPSTIFIDEIDSLCTSRGASGEHESSRRVKSEL
LVQMDGVNNSSTNEDGQPKNVMVLAATNFPWDIDEALRRRLEKRIYIPLPSSESRKSLIN
INLRTVEVSSDVNIDEVAKRTEGYSGDDLTNVCRDAAMNGMRRKIAGKTRDEIKNMSKDY
ISKDPVAMCDFEEALAKVQKSVSTSDIEQHENWNGKFAI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccgctcgccaggctgcaggtccacctcaagctcgcgcgggactacgcgctc
gacggtctctacgacacctccatcatcatcttcgacggcgtcctcgcgcagatcaacaag
catctgactaatttggacgatggtttcactcgcacaaaatggatgaaatgtaagcaagct
atcagtgaagaggtggagattgtgaggcagcttgatgccctaatgaagtcctttaaagaa
gctcctgggagtgggacaatgcggtcctcatcgcctcctattcgctctaataaatcattt
ctgttccaaccgttggatgagtatccaacatcattgccacaaacctttgatgaccctgat
gtgtgggcgcctccaaaagatagaccaacccgaaggttaacaagaggccaatctagtgcc
aaaaaatcctcccaagatggagcttggtcacggggtccatcgaagactggaacacctagc
cgtcgtgcaaagcccaacgggagtaaatcaagctctgtggtgagatcatctactgcttct
agcgctggtgggaggaaaggaaaatcaagttcaagcaagggtgattcagcgagtagcgat
gccgaagaaggcaagtccaagaagtcacgatatgatgggccagatggggacttagttgcc
atgcttgaaagagatgttctagattcgaccccaggagtgagatgggatgatgttgcagga
cttagtgaggccaaaagactccttgacgaggccgttgtgcttcctctcttgatgcctaaa
tattttcagggtattcgtcgaccttggaaaggtgttcttatgtttggcccaccaggtact
ggaaagacccttttggcaaaggcagtagctacagaatgtcgcacaacattctttaatgtt
tcttctgcaacattggcttctaaatggcggggggagggtgtgcgcatggtccgttgttta
tttgaacttgcaagggcccacgctccaagtactatcttcattgatgaaattgactcctta
tgtacatctcgtggagcttctggtgagcatgaatcatcgaggagggtaaagtctgaactt
ctagtgcaaatggatggtgttaacaatagctctaccaatgaagatggtcagccaaaaaat
gttatggttctggcagccaccaactttccatgggatattgatgaagcactcaggcggagg
ctggaaaagcgtatttacattccacttccaagttctgaaagcagaaagtcactcatcaac
attaatcttagaacggttgaggtatcttctgatgttaacatcgatgaagttgcaaagagg
actgaaggctacagtggcgatgaccttacaaatgtttgccgtgatgctgcgatgaatggc
atgaggcgaaagattgcaggcaagacccgtgacgagatcaagaacatgtcgaaggactat
atctcgaaggacccagtggccatgtgcgacttcgaagaggctttggccaaggtccagaag
agtgtttcgacctctgatatcgagcagcacgagaactggaacgggaagtttgcaatttaa
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