Limnochorda pilosa: LIP_2399
Help
Entry
LIP_2399 CDS
T04150
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpil03000
]
LIP_2399
Transcription factors [BR:
lpil03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LIP_2399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Sigma70_r4
HTH_Crp_2
Dimerisation
HTH_24
HTH_5
DnaB_bind
HTH_10
HTH_23
TrmB
DUF7646
Rrf2
MarR
HTH_Tnp_ISL3
HTH_17
DUF4143
Motif
Other DBs
NCBI-ProteinID:
BAS28240
UniProt:
A0A0K2SMB0
LinkDB
All DBs
Position
complement(2546733..2547557)
Genome browser
AA seq
274 aa
AA seq
DB search
MRKAGGTQRIGTLRTAAQVVDLLAAAGDRDLTLKEISEMLGITKPTALRILMTLTDLRLV
ERDSETQRYRLGLRLLELGSAVQERLQIPVRARPLLEQLAQRTDETVHLCVLDEGQAVYV
DKIEGAQAIRLYSRIGRRVPLHCTAVGKVLLADLPAAERRRIIARWGMKPYTKNTLTDYL
LLEQALDEVRREGVAFDREEHEEGITCIGAPVRDFSGRVKAAISVTVPVFRTSPEHLEQM
VPWVKETALRISERCGYRPDLAEPSRQAQGTTLG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaggcaggcggaacgcaacggatcggcacgctgcggacggcggcccaggtggtg
gatctgctcgcggccgcgggggaccgggacctgaccctcaaggagatctccgagatgctg
gggatcaccaagcctacggcgctgcggatcctcatgaccctcaccgacctgaggttggtg
gagcgggattccgaaacccagaggtaccgccttggcttgcggctcctggagctggggagc
gccgtgcaggagcggctccagatcccggtacgggcccgccccctgctggagcaactcgcc
caacggacggacgagacggtccatctgtgcgtcctggacgaggggcaggctgtctacgtg
gacaagatcgagggcgcgcaggccatccggctctactcgcgcatcgggcggcgggtcccg
ctccactgcacggcggtggggaaggtgctcctggccgaccttcccgcagcggagcggcgg
cgcatcatcgcccgctggggcatgaagccctacacgaaaaacacgttgaccgactacctg
ctgctggaacaggccctggacgaggtgcgccgggaaggggtcgcctttgaccgggaggag
cacgaagagggcatcacgtgcatcggcgctccggtgcgagacttctcggggcgggtgaag
gcggccatcagtgtgacggtgcctgtgttccggacctcgcccgagcacctggagcagatg
gtcccgtgggtgaaggagaccgccctccgcatctccgagcggtgcgggtaccggccggac
ctggcggagccctcacggcaggcgcagggtaccaccctgggctga
DBGET
integrated database retrieval system
