Lactiplantibacillus plantarum JDM1: JDM1_1557
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Entry
JDM1_1557 CDS
T00946
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDM1_1557 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpj03032
]
JDM1_1557 (rnhB)
Enzymes [BR:
lpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
JDM1_1557 (rnhB)
DNA replication proteins [BR:
lpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
JDM1_1557 (rnhB)
Elongation factors (archaeal)
JDM1_1557 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Apo-VLDL-II
Motif
Other DBs
NCBI-ProteinID:
ACT62444
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All DBs
Position
complement(1654797..1655564)
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AA seq
255 aa
AA seq
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MPERTIADFKRLLADQPTASLLAAAQADPRKGVQQAYQHYLRQAEKQAALVTRFNQHMRL
ERDFWAHGGQYVAGIDEVGRGPLAGPVVTAAVVLDDHFDLLEVNDSKQLTAKKRAALMPR
ILEEAVAVGIGVADAQQIDQLNIYEATRVAMAQAVRNLSVRPTRLLVDAMQVPVPIEQTR
LIKGDAKSASISAASIVAKVVRDHLMTMYDQVYPGYDFADNMGYGTAKHLAGLASLGATP
IHRQSFSPVRNAKRV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgaacgattgcggattttaaacggctactggctgaccaaccaacggcatcg
cttctagccgcggctcaagccgatcctcgcaagggcgtgcaacaggcttatcaacactat
ttgcgacaagctgaaaaacaggcggcgttagtgacacgttttaatcaacatatgcgttta
gaacgggatttttgggcccacggcggacaatacgttgctgggatcgatgaagttggtcgc
ggcccgttagctggaccagtcgtaactgccgctgtagtcttggacgatcattttgatttg
ctagaagtcaatgattcaaagcaattaaccgctaagaaacgggcggccctgatgccacgg
atcctagaagaagcggtcgccgtgggaatcggcgttgcggatgcccaacaaattgatcaa
ttaaacatttatgaggcgacccgagtcgcaatggcccaagccgtccgtaacctgtccgtc
cggccaacacgtttactagttgatgcgatgcaggtgccggtaccaattgaacagacccgt
ctaatcaagggcgatgcgaaaagcgcgagcatctcggcggctagtattgtcgccaaagtc
gtccgggatcacttaatgacaatgtatgatcaagtgtatcccgggtacgactttgctgat
aatatgggctacgggactgctaagcatttggccgggttggccagtctcggcgctacgccg
attcatcgccaatctttttcaccggttcgaaatgctaagcgggtctaa
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