Lactiplantibacillus plantarum JDM1: JDM1_1904
Help
Entry
JDM1_1904 CDS
T00946
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JDM1_1904 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpj03400
]
JDM1_1904 (mutS)
DNA repair and recombination proteins [BR:
lpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JDM1_1904 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_21
AAA_22
MutS_III
Gp-FAR-1
AAA_24
DivIVA
Motif
Other DBs
NCBI-ProteinID:
ACT62791
LinkDB
All DBs
Position
complement(2016844..2019207)
Genome browser
AA seq
787 aa
AA seq
DB search
MNSKVLNTLEYQQVKQQLAPYLVSATGQQALNELHPMTSVADIQRALDETNDGAEVYRLK
GGIPVARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFAELLEDAPENDIRH
LFDEVAELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRRTETEIRNQMGHYTRG
HDAKYLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQ
NQVAEKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPAVSPQ
NEVYLRQARHPLIDPRKVVANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGL
FIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGA
GTDPQEGAALAIAILDAIGAKGTQVVATTHYPELKAYGFNRPDTINASMEFDEETLKPTY
RLLVGIPGRSNALDIAQRLGIPQTIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLH
LKTQVADSEKLHRQLKSEFNAYQQRKDQLIEDAKVQANTIVEQSKTKADAIISDLRKKQL
ASGTATVKENELIDAKGALNALEQQPKLKKNRVLRRAKAQHDFHEGDDVLVKSYGQRGVL
MRQMGKHEWEVQLGILKMKISDGDLERVKPEEPKRARATVQSAHASHVSPNLDLRGVRYE
DAMTQVDRYIDAALLAGYPSVTIVHGKGTGALREGITNYLKSNRQVKSFHFAAPNHGGNG
ATEVQFK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtgaattccaaagtattgaatacgttagagtaccaacaagtaaaacaacaattagcacca
tacttagtctcggcaacgggccaacaagcactcaatgaactacatccaatgaccagcgtt
gcggatattcaacgggccttagatgaaaccaacgacggggcagaagtgtatcgtttaaag
ggtggcattccggtcgctcgtttagcggatataaaaccgcatatgaaacggttagctatc
ggtgcgaccctgaatgggagtgaactcgggcaagttgggcgggtgttacggacaacgcgc
gcaatcacgcgcttttttgccgagttgctagaagatgcacctgagaatgatattcgacac
ctgtttgatgaagttgcagaattagttactttaccagatgtgacgaagcgcctcgctact
gccattgaaggtgacggtcatatcacggatgaggcgtcaccagaactgagccggattcgg
agcaatatccgtcgtactgaaacagagattcgtaaccaaatgggtcattatacccgtggc
catgatgccaagtatttaagcgacccaatcatcacgattagaaacgaccgttacgttatc
ccggtcaaggccgagaatcgcagtcggtttggtggcatcgtgcatgatcaatcagcgagt
gggcagacgctctttatcgaaccccaggctgtcatggcgatgaatgaccggttacggcaa
aatcaagttgcggaaaagcaagaagaacagcgtatcttggaggaactctccaacttaatt
gcgccttaccaggacgaaatcattaataatgcggcgattcttggacatttcgactttatc
aatgccaaggcgcgttatgcgcatgatatgaaggcgactgaaccggccgtttcaccccaa
aatgaagtctatctacggcaagcacgccaccccctgattgatcctcgcaaagtcgttgcc
aatgatattagtttaggtactgattatcaggcgatggtcattacggggcctaacactggt
gggaagacgattacgttgaagacgctgggattactacaattgatggcccagtcgggatta
tttattcctgttgaagccggaagtcgcgttggcgtttataatgagatctttgcggatatt
ggtgatgaacagtcgatcgaacagaatttaagtacgttctcatcccatatggaaaatatt
gaaagtttcttagcgcagatcgacgctcacagtttagtactcgttgatgaattgggtgcc
gggactgatccgcaagaaggtgcggcactggcaatcgcaattctggatgccattggggcc
aagggaacccaagtcgttgcgacgactcactacccagaacttaaggcgtatgggtttaac
cgacctgatacgatcaatgctagtatggagtttgacgaagaaacactcaagccgacgtac
cggctattggtcgggattcctggtcgaagtaatgcgctcgatatcgcacagcggttgggc
atcccgcaaacgattgttgatcaagctcggtcgttgacggatacggatagtcaagacctc
aacgcaatgattgcggatttggtgacgaagcgcaaacaggttgaagatgaacaactgcat
ctgaaaacccaagtggcagattctgaaaaattgcaccggcagttgaagagcgaattcaat
gcgtatcaacagcgtaaagatcagttgatcgaagatgctaaagtgcaggcgaacaccatt
gttgagcaaagtaagactaaggccgatgctatcattagtgatttgcgtaagaaacaatta
gcaagtggcacggcgactgtcaaagaaaacgagttgattgatgcgaagggcgcgttgaat
gcattggagcaacagcctaagctcaagaaaaaccgtgtattacggcgtgccaaagcccaa
catgattttcatgaaggtgatgacgtgctggtcaaatcgtatggtcaacgtggtgtgttg
atgcgtcagatgggtaaacacgagtgggaagtccaactcggcatcttgaagatgaagatt
agtgacggtgacttggaacgcgttaagccagaagagccaaaacgcgcgcgtgctactgtt
cagagtgcccacgcgagtcacgtttcgccgaacttggacctgcgcggtgtgcgttatgaa
gacgcgatgactcaagttgatcgctatattgatgctgcgttgttggccgggtatccttcc
gtcacaatcgtacatgggaagggaactggtgctctacgagaaggcattaccaactatctc
aagtctaatcggcaagtcaagtcgtttcactttgctgcgccaaatcatggcggcaatggt
gcgactgaggtgcagttcaaataa
DBGET
integrated database retrieval system
