Limulus polyphemus (Atlantic horseshoe crab): 106461785
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Entry
106461785 CDS
T08968
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106461785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106461785
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106461785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_14
TPR_16
TPR_19
TPR_12
TPR_9
PPTA
TPR_7
ANAPC8
ARM_TT21_C
ARM_TT21
ChAPs
RPN7
TPR_MalT
TPR_3
TPR_Slam
TPR_10
COG4_N
Death_TNFRSF11B
ANAPC3
Motif
Other DBs
NCBI-GeneID:
106461785
NCBI-ProteinID:
XP_013777093
UniProt:
A0ABM1B8Q7
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MDAKEVKMLLKQAREAIRDKDFKSALKYCKTVLKLDKNNYHAWVFIGAAAEEMGELEQTL
AAFNKAIDISPDQVLAWQGLCNFYEKHYNDDNRKALENVYKKLKELMNNDKAKNMEILQK
LYNLYKIQEDFLSALNVLLEQVQLCDENPKLEMTTWISITDMLQEDVGGIDVDDLMKKAY
EHISKLLNCVSDDSDFNLDDICRKYLIFLKSKKDSTNAAMEAKRLSKEFPQLSAPVEYFC
EFLLEKYVTDKVISDDIVPSLQELQDKNPESGSTSLLYGLYLYLFEKNCIEALDAVKKGL
YYFPNNIIAWILFTEIQLAIHDYYGSEKSSLQALQLYNSSKVAISSTLVGKMYLHLGIAL
FGQQLYEKGLQAFSKAESKIGRTEDLLYWLCITALEKNDLSQAKHLRDELQKLAGESLKT
NQTCILISLNEEKPKEALEQLLKVVKMEENDSYTFHLLGLSLWKTKNMDQAKISFLKAAK
LDPFFYKNFLYLGHYYKSIGDFEKALQCYNKSFDLNKRNDIVGAAFSDILFECGETDLNL
KLLKKITSTAPVGSAKWAWLRLGLHQLRVGETMASVLSLQNALKADSSDIHCWECLGDAY
LQRGSFNAALKAFTKASELQPNQLYPQYQKANIKQLLGSYKEAIEEYQCILKLEPGYVPV
LKGLTEAHLQQARLHFSKSLFGLALDSCNEALQTISTAVLSRPNFSCLWKLAGDACMLPA
CLGPQKFSLWVPEVLFSQGFSSQELKKICKSEAMTLAATLYSRGLSLLPEVPGLWHDLGF
CYYFQAEESSDSQFATELAKKSVMCLKKAVSMQSTSPHTWNSLGVVSLSPHVRNYNLAQH
CFIKSISCEPNNFVAWTNLGVLYLQNDNIQLAHEAFKVAQSLEPSYSVCWIGQALIAEKV
NHPDTLDLFRHTTLLGEHPEGLLGYAHWVCTSLQDLGNRNTNFYKYNIVQMRAISTAVDA
LTKFTRKIHDSSSAFCMLGLVLERERLYKGACWAFKMSLLLLEEENCDEIIDKVRTNYGR
LLALIGQNDEALEQFSQVKNMDLAAYCDLALTYQKLGKLKDACQAYRQALTLATVQGDQS
HILVALAMVAVKIQGLESAKTPLFQSSQKKPASVQGLQALCALGLLLNDFSLSTAAMKEL
CPHQQDPYYGADIAFLAACVLIVQGKMKMALHHLSKFAHGHPNSASIWSHLAGHLLSFHP
YKATTAARCAMSAVLTGKNVTGLPLLVIQCHMVAGNKNRSLQTAQKAVHLFPDKVEHWCS
LLGILSSSTSQENFVNALFVFVRKILNGSSPALESWLLQCVKYHRLIQKRKDVTRTESLS
TDSLTSTLVLDAVADALTKPRFDQSCVPTIAVALQKDPKCLFGWFSIALLQANSEKYKDS
INTLQRVLKSENTVKSLSRKVVSLLHLAVIALNIQKTRNEDEWKSLVQETITEVLKIDSH
NQGALFLQALVLAGKSENSRLIERCLKKVLNCADPAEPKWMEWAARRFMVAIYKRKNNSD
GIERLLEGAIACGDTEFVNAHKVLEETLNNKVVD
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaaagaagtgaagatgctactaaaacaagctagagaggcaatacgtgacaaa
gatttcaaaagtgcgttgaaatactgtaaaacggtgttaaaattagataaaaataactac
catgcgtgggtttttattggggctgctgctgaagaaatgggagagttggaacaaacgctc
gcagctttcaataaagctatagacatttctccagatcaagtacttgcttggcaaggactt
tgcaatttttatgaaaaacattataatgatgataatagaaaagcacttgagaatgtttat
aaaaagttaaaagaattaatgaataatgataaagccaagaatatggaaattttacagaaa
ttatataacttgtataaaattcaagaagattttttgtctgctttgaatgttttgttagag
caggttcaactttgtgacgaaaacccaaaacttgaaatgacaacttggatttcaattact
gatatgttacaggaagatgtaggtggtatagatgtggatgatttaatgaaaaaagcatat
gaacatatttcaaagttgcttaattgtgtgtcagatgactctgactttaatcttgatgat
atatgtaggaaatacctgatatttcttaaatcaaagaaggattcaacaaatgctgcaatg
gaagctaaacgtttatcaaaagagtttcctcagctttctgctccagttgaatatttttgt
gaatttcttttggagaaatacgtaactgataaagtcataagtgatgatattgtaccttca
ttacaagagttgcaggataaaaatcctgaatctggaagtaccagtttgctctatggactt
tacttgtatttatttgaaaaaaactgcattgaggctcttgatgcagtaaaaaaaggattg
tattattttcctaataacatcatagcatggattttgtttactgaaatccagctagctatt
catgattactatggcagtgaaaaaagctctcttcaggctcttcagctttataacagctct
aaagtagctatttcatcaactctagttggaaagatgtacttgcaccttggtattgccctt
tttgggcagcagttgtatgaaaaaggattacaggctttcagcaaagctgaatcaaaaatt
ggaaggactgaagatttactttactggttgtgtataactgctcttgaaaagaatgatttg
tctcaagccaaacatcttagagatgaactccaaaagttagcaggagagagtttaaaaaca
aatcaaacttgcattctcataagtcttaatgaagaaaagccaaaagaggctttagaacaa
cttttaaaagtagttaaaatggaggaaaatgactcgtatacttttcaccttcttgggctt
agtttatggaaaacaaaaaacatggatcaagcaaaaatcagctttcttaaagctgctaaa
ctagatccatttttctacaaaaatttcctataccttggacattactataaaagtattgga
gattttgaaaaggctttgcaatgctataacaaatcatttgaccttaataaaaggaatgat
attgttggagctgcttttagtgatatcctctttgaatgtggagaaacagatctgaattta
aagttgttgaagaaaattacttcaacagctccagttggaagtgccaagtgggcttggcta
cgtcttggcttacaccagctgagagtaggagaaacaatggcttcagtgttatccctgcag
aatgccttgaaggctgactcttcagatattcattgctgggaatgcttaggagatgcatac
ctacagagaggaagtttcaatgctgctttgaaagcttttactaaagcatctgagcttcag
cctaaccagttgtacccacagtatcaaaaagcaaatattaagcagttgcttggctcatac
aaagaagcaattgaagaatatcagtgtattttgaaactggaacctggttacgtaccagtc
cttaaaggcctgacagaagctcatcttcagcaagccagacttcatttttcaaagtccttg
tttgggttagctcttgattcttgcaatgaagcactccaaacaattagtactgcagtactc
tctagaccaaatttttcttgtttatggaaattagctggagatgcctgcatgttgcctgcc
tgtcttgggcctcagaaattttcactttgggttccagaggttttgttttctcaagggttc
agtagtcaagaattgaaaaaaatctgcaagagtgaagctatgactttagcagcaacattg
tacagtagaggtttatcgttattacctgaagtacctgggctgtggcatgaccttggtttt
tgttattactttcaggctgaagaaagttctgacagtcagtttgctacagaattagcaaaa
aagtcagtaatgtgtttgaaaaaagctgtcagtatgcaatcaacttcaccccatacttgg
aacagtcttggagttgtttccctgagcccacatgtaaggaattataacttagctcaacat
tgttttataaaatctatcagttgtgagcctaataattttgtagcttggactaacttagga
gttctttaccttcagaatgacaatattcaactagcacatgaagcctttaaggtagcacag
tcattagaaccttcttattcagtttgttggataggccaagcattaattgctgaaaaggtt
aaccatccagacacgctagatttatttcgccatacaactcttttaggtgaacatccagag
ggattgttagggtatgcacattgggtttgtacaagtttacaggacttaggaaaccgtaac
acaaatttctataaatacaacatagtccaaatgagagctatttcaacagctgtcgatgca
ttaacaaagttcactagaaaaattcatgattcttcttcagctttttgtatgctaggactg
gtactagagagagagagactttacaaaggagcctgttgggcttttaagatgtcccttctt
cttcttgaggaggaaaattgtgatgaaattattgacaaggtgagaactaattatggccgt
ctcctagctctgatagggcagaatgatgaagctcttgagcagttctcacaagtaaagaat
atggatctggcagcatattgtgacttggctctcacctatcagaagcttggcaaattaaaa
gatgcctgtcaagcttacagacaagcattgactcttgctacagtccagggagatcaatca
cacatactagttgctttggcaatggttgctgtaaaaattcagggcttagaatcagcaaaa
actcctttattccagagttcccaaaagaaaccagcttctgttcaaggtctccaagcactt
tgtgcactgggtcttttgctaaatgacttcagcttatctactgctgccatgaaagaactg
tgtcctcatcaacaagatccttattatggggcagacattgcctttcttgctgcttgtgtc
ttgatagttcaagggaagatgaaaatggctttacatcatttgagtaagtttgcccatgga
caccctaacagtgcatctatttggtctcatttagctggccacttgttatccttccatcct
tacaaagctactacagcagcacgctgtgcaatgtctgctgttttgaccggtaaaaatgtc
acaggtcttccattactagtcatacagtgtcacatggtagcaggaaacaagaacagaagt
ctacaaacagctcaaaaagcagtacatctcttcccagataaagttgaacactggtgttca
ttgcttggaatcttatcctcctctaccagtcaggaaaattttgttaatgcactatttgtt
tttgtcagaaagatattgaatggtagctcaccagcacttgagtcatggctcttacaatgt
gtgaaatatcatcggctcattcaaaagagaaaggatgtgactagaaccgagtcactatct
acagattcattgacatcaacactggttttagatgctgttgccgatgcgctgaccaaaccc
agatttgatcagtcttgtgtacctacaattgctgtggctctgcagaaagatccaaaatgt
ttgtttggctggttttctatagctttacttcaggccaacagtgaaaagtacaaagattcc
ataaacaccctgcaacgtgtcttgaagtcagaaaacactgtaaaatcactgtccagaaaa
gtcgtatcactgctgcatttagctgtcatagcattgaatatccagaagacgaggaatgaa
gatgagtggaagtcacttgttcaagaaaccattactgaagttttgaaaattgattctcac
aatcaaggagcattgtttcttcaagcactagttcttgctggtaaatcagaaaattcacgt
ttgattgagagatgtctgaagaaagttctaaattgtgcagacccagctgaaccaaagtgg
atggaatgggctgcacgaaggtttatggttgctatttataaaagaaaaaacaacagtgat
ggcatagaaagactgctggagggagctattgcttgtggtgatacagagtttgtgaatgct
cataaagtccttgaggaaaccctaaataataaagttgtggattaa
DBGET
integrated database retrieval system
