Limulus polyphemus (Atlantic horseshoe crab): 106461843
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Entry
106461843 CDS
T08968
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106461843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106461843
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106461843
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106461843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
CNOT1_TTP_bind
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106461843
NCBI-ProteinID:
XP_013777158
UniProt:
A0ABM1B8U5
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MNLDSLSFALSQVSYLAANLTKKHFKSSVQEITTSLNPHPHLLPNLSKVLKLTQVQEVAF
GLALLHSSHGDICNYAIQFVKEKIPELLQAYTNSGGLEQSLQDFSTEFVHLLLIFILHTS
KDKAGLSSEDKEAFLQTLRRDFPQEKVPVILAPLLYPTKQDIFMEKAVSVSRTMAKEIDD
SVVDLVREIGYFFTASLDACKSNLINLCQNQITPSIVARILGLMARTHTGLGDGILLQEY
GVEARGMRDVSKKSEGHSNWNVDVFVQALNELVPSLNWKDVVWELDHSGFIVKDREGIKL
LWHSLMIGLDHNIFPSEYIFRHWRNSEGQLSLFQQILKNSDVLCLLDYSCNTIETDILKP
PPEKNRDISNWMSVDLVETLLHLSDVGYYRSVQELFKFPIQNCPDVLALGLLQISSPLHL
LQQEILSNLIPIFLENHPNSAIVLQYAWYSEVHSATVRPIVMHAMIEWCVRGDYDHSHLS
RILDVTQDLKALSDLMNSTSFPFVIDLACMAYRREYVKLDTWLSEKIEEHGERFIQACVS
FLKRHCPKMMGELVKEDKTSNLAHPSPEIIITMLTCLQNFPGISKELMEAVLAITKKYYA
LLSKLSHPPTGVLNTPHDPQPVFLAATMGESANPFDSLGGLNTSMGNLYVGDVTNFASSS
APDYPFSAGLSSFPQPTPGSPVKLLQVANPVVQTGPSLSQNPFSSIIPSFQSQLPGLPGQ
LPGLPGQFGSSIGMVISPAISLAPPVTGYVPPTVDHLRQDDISTILSEVNMHMSKEVEDE
ANGYFKRIYRHSSHPPILIDEVLQMLRKFQESPIKRERDMFNCMLRKLFEVYHFLHQHSD
QELLITAEIFGGIVEQGLVTYVFLGLILRCIFDALKNPYGNKMYYFGIIALDRCKRRLKE
FPQYCCHLSSISHFLDFPAHLIEFIQYGACSQDPPNHPQGVPLPQSMVIMSSGIGPIVPV
SVHTSSTIYTSSTAITTLAKKTSTIGTARPSIANTTNIDTLLVATEKGEKMMFPPESVQD
KVEFIINNLSQINLVQKTEEYKKLVKEEYRPWAAQYMVMKRVSIEHNFHTLYSNFLDKVR
LPDLRKLIVHETLRNIKVLLRSDKGIENFSDRSLLKNLGHWLGMLTLAKNKPILQIDIDI
KALLIEAYHKGQKELLYVVPFVAKILESCAKSRIFKPPNPWTIGIMSALAELHQEPELKL
TLKFEIEVLCKNLSLDINWLSQPFSSIMTSSRSFDTNLHAGK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagattctttgtcatttgcattgtcgcaagtcagttatttggcagcaaattta
acaaagaaacatttcaagtctagtgtccaagaaataacaacgagcttaaacccacatcct
catcttctgccaaatttaagtaaagtgcttaaacttacccaggtgcaagaagtagcattt
ggacttgcacttcttcattcttcacatggtgatatctgtaattacgcaatccaatttgta
aaagagaagatcccagaacttttacaggcttacactaactcaggaggtctagaacaaagc
ttgcaggatttttcaaccgagtttgttcatctgttgttaatctttatcctccatacttcc
aaagacaaagctgggctgagcagtgaagataaagaagcttttttgcaaactctgagaaga
gactttcctcaagaaaaagtaccagttattttggcacccttgttataccccacaaaacag
gatatttttatggaaaaagcagtttctgtgtcaagaacaatggctaaagagattgatgat
tcagtggtagaccttgttagagaaatagggtacttttttaccgcaagcctcgatgcttgc
aagtcaaacttgattaatttatgccagaaccagatcacaccatcaattgtggcaagaatt
ttgggcttgatggcaagaacacatactgggctgggtgatggtattttacttcaggaatat
ggtgtagaggcaagaggtatgcgggatgtttctaagaagtcagaaggacactccaactgg
aatgtggatgtttttgttcaagcccttaatgagctagtaccatctttgaattggaaggat
gtagtatgggaattggatcattctggttttatagtgaaagacagagagggtataaaactt
ttgtggcattcattgatgataggactagaccataacatatttccatctgagtatatattt
agacattggagaaattctgaaggacagctctcactatttcaacaaattttaaagaactca
gatgtattatgccttttggattacagctgtaacactattgaaactgatattttaaaaccc
ccaccagagaagaacagagatatttctaattggatgtctgtggacttggtagaaactctt
cttcacctttcagatgtaggttattacaggtcagtacaagaactttttaagtttcccatc
caaaactgtcctgatgtattggctttgggtcttctacaaatttcgagccctttacacctc
ttacaacaagaaattttgtccaacttgattcctatatttttagaaaatcatcccaattca
gctatagttctgcaatatgcttggtattcagaggtccattctgccacagttagacctatc
gtcatgcatgctatgattgaatggtgtgttagaggagattatgaccatagtcatctatca
cgaatattggatgtaacacaagatttgaaagctttgtctgacttaatgaattctacttca
tttccctttgttatagacttagcatgtatggcatatcgacgagaatatgtgaagctggat
acgtggttatcagagaagattgaagaacatggagagcgttttattcaagcttgtgttagt
ttcttaaagagacattgtccaaagatgatgggagaattagtgaaagaagataagacttca
aatcttgcacatccttcaccagaaatcataattacgatgttgacgtgcctgcaaaatttt
cctggcatttccaaagaactcatggaggcagtcttagcaattacgaagaagtactatgca
ttattgagcaaacttagtcatcctcctactggtgtactaaatacccctcatgacccacaa
ccagttttcttggctgcaactatgggagaatcagctaatccttttgatagcttaggtggt
cttaatacatcaatgggtaatctgtatgtgggagatgtcaccaattttgccagcagtagt
gctccagattatcccttcagtgctggcttaagttcgtttccacaaccaactccaggttct
cctgtaaagcttctccaagttgcaaatccagttgttcaaactggaccatctctaagtcag
aatcctttttctagcatcataccatcctttcagtctcaattacctggtctgcctggacaa
ttacctggactgcctggacaatttggttcaagtattggtatggttatatcgcctgctatt
agtttggccccaccagtgactggatatgttccacctactgttgatcatttgagacaagat
gatatatcaactatattatcagaggtgaacatgcatatgtccaaagaagtagaagatgaa
gctaatggctactttaaaagaatatataggcattcttctcacccacctatattgattgat
gaagttttgcagatgttgaggaagttccaagagtctcctattaaaagggaaagggacatg
ttcaactgtatgctacgaaagttgtttgaggtgtaccactttttacatcaacactctgac
caagaacttttgataactgcagaaatctttggaggcattgttgaacaaggccttgtaact
tacgtgttcttgggcttgatattacgctgcatatttgatgcactcaaaaatccttatgga
aacaagatgtattactttggaataatagctcttgacaggtgtaaaagaagattaaaagaa
ttcccccaatactgttgccatctttcatctatcagtcactttctagattttcctgctcat
ttgattgagtttattcagtatggagcttgctcccaggacccaccaaaccatccccagggt
gtgcctttaccacaaagtatggttattatgagttctggtattggtcctatagttcctgta
tcagttcacacttcttctactatatatacctcttcaactgccataactactttggctaaa
aaaacctcaactattggaactgcaaggccatcaattgccaataccactaacattgacaca
ttactggtagcaactgagaaaggagagaagatgatgtttcctcctgaatcggttcaagat
aaagtggaatttatcattaacaacctttcacaaataaacctggtacaaaagacagaagag
tataaaaaattggtgaaggaagaatacaggccatgggctgcccagtacatggtgatgaag
agagtatccattgagcacaatttccacacattgtactccaactttctagataaagtacgt
ctaccagatcttagaaaactgatagtgcatgaaaccttacgcaacatcaaggttcttcta
cgaagtgacaagggaattgaaaacttttcagatcgctctttgttgaagaacttgggccat
tggttaggaatgttgactttggcaaaaaataaaccaattttgcaaatagatatagacata
aaagcacttctcattgaagcttaccataaaggacagaaagaattactttatgtagttccc
tttgttgccaaaattttagagtcctgtgccaaaagtcgaattttcaagccacccaaccca
tggacaataggaatcatgagtgctttagcagagttacaccaagaaccagaattaaaattg
acactaaagtttgagattgaagtcctatgtaagaatctttctttggacataaattggctt
tctcagccattttccagcattatgacatcatctcgttctttcgatacaaatcttcatgct
ggtaag
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integrated database retrieval system
