Limulus polyphemus (Atlantic horseshoe crab): 106466373
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Entry
106466373 CDS
T08968
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04512
ECM-receptor interaction
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106466373
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106466373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lpol00535
]
106466373
Proteoglycans [BR:
lpol00535
]
Extracellular matrix (ECM) proteoglycans
Others
106466373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106466373
NCBI-ProteinID:
XP_022250072
UniProt:
A0ABM1T2G6
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
GEKGEKGENGTPGLRGAPGNPGATGPRGTPGENGNDVLDGLVGQVGTPGPPGQRGEIGLP
GKSGPPGAPGEKGVSGTIGESGPIGPRGLKGESGEKGFPGPSGPAGLPGPPGGIVLGTGE
TDGFLYPGPTGSKGDPGKQGLPGLPGEKGNLGVFGFPGSKGIKGSKGEKGGHGRKGFRGK
RGKRGQTGRQGAQGKRGTHGLLGEVGQKGLQGKPGLTGKDGYHGIPGMKGEKGNQGEQGE
AGEIIMVDGEVRIAQPGPKGEPGIDGSQGEPGEIGPSGKPGPPGHVGLPGLPGPSGLPGQ
QSEESKGPKGSKGDPGSPGAIGPLGEPGYPGYRGPTGKPGQKGDNGDTGSVGLRGPRGFI
GNVGPHGLIGPPGSPGNNGQPGEPGLPGLPGPSGPKGDYGTMDFKLRGYGGIQGLKGSHG
PTGFKGMAGERGKIGKRGSIGPSGSIGMPGIKGPSGIPGAPGTKGPSGMPGLQGRPGKHF
VEEEVREICAAVLREQMDELTSGLHGPRGHSGHGRPGTPGLPGKRGIPGDAGSPGLPGER
GFLGMQGLPGSHGHSGSKGKKGDKGERGLEGVGIEGPMGIQGIPGPVGPQGSSHPGQPGE
RGPSGRQGLPGVQGIVGPPGPPGYCKLCV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ggagaaaaaggtgaaaaaggagagaatggtacacctggacttcgtggtgctccgggtaat
ccaggagctactggccctcgaggaacaccgggggaaaatggaaatgatgtgttagacgga
cttgttgggcaggtaggaactcccgggcctccaggacaaaggggagagattggtttaccg
ggaaaaagtggtccacctggtgctccaggagaaaagggggtgtccggaactattggagag
tcaggtccaataggccctagaggacttaagggagaatcaggagagaagggtttccctgga
ccttccggacctgctggcctaccaggccctccaggcggaattgtactaggaacaggagag
acagatggatttttgtaccctggaccaacaggttcaaaaggtgatcctggaaaacaaggc
ctacctggattgccgggagaaaagggaaatctgggagtatttggatttccagggtcaaag
ggaattaagggtagtaaaggagagaaaggtggccatggaagaaaaggatttagaggaaaa
agaggaaagcggggtcaaacaggaagacaaggagcacaaggaaaaagggggacccatggc
ttattaggagaagttggacaaaaaggacttcaaggaaaacctggtttaacagggaaagat
ggttatcatggaatacctgggatgaaaggagaaaagggcaatcaaggtgaacaaggagaa
gcaggggaaattattatggttgatggagaggtcagaattgctcaaccagggccaaaaggg
gaaccaggtattgatggatcacagggagaacctggagaaattggaccttctggaaaacca
ggacctccaggacacgtgggacttccaggactccctggaccatcaggactgccaggtcaa
cagagtgaagagtccaagggtcctaaaggttctaaaggtgaccctggatctccaggtgcc
attggacctttgggagagcctggataccctggctatagaggaccaactggcaaaccaggt
cagaagggtgacaatggggatactgggtcagtaggactaagaggacctcgtggttttatt
ggaaatgtgggccctcatggactgattggacctccaggatctcctggaaataatgggcaa
ccaggagaaccaggcttacctgggttaccaggaccttcaggacccaagggagactatgga
acgatggattttaaattgagaggatatggaggcatacaggggctaaagggttctcatggc
cccacaggttttaaaggaatggcaggtgaacgagggaaaataggaaaaagaggctcaata
ggtccttcaggatctataggaatgccaggaatcaaaggaccttcaggaatcccaggagct
cctggaaccaaaggcccatcaggcatgcctgggcttcaaggtcgtccgggcaaacatttt
gtagaggaagaagtgagagagatctgtgctgcagttcttcgagaacagatggatgaatta
accagtggtcttcatggtccacgtggccattctggccatggaaggccaggtacaccaggt
ctgcctggaaaacgaggaattcctggagatgcaggaagtccaggtttacctggagaaagg
ggatttctgggaatgcaagggctacctggctctcatggacactccggttctaaaggaaag
aaaggtgataaaggagaacgaggtttggaaggagttggtattgaaggaccaatgggtatt
cagggtataccaggtccagttggacctcagggatccagtcatcctggccagccaggtgaa
agaggaccatcaggaagacaaggtttgcctggagtccaaggtattgtaggtccaccagga
cctcctggctattgcaagctctgcgtgtaa
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