Lonsdalea populi: I6N93_04695
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Entry
I6N93_04695 CDS
T06954
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00730
Thiamine metabolism
lpop01100
Metabolic pathways
lpop01240
Biosynthesis of cofactors
lpop04122
Sulfur relay system
Module
lpop_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
I6N93_04695 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
I6N93_04695 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpop03016
]
I6N93_04695 (thiI)
Enzymes [BR:
lpop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
I6N93_04695 (thiI)
Transfer RNA biogenesis [BR:
lpop03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
I6N93_04695 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QPQ25095
LinkDB
All DBs
Position
1050972..1052420
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDHIEVRAQDESQR
LIIRDALTRIPGIHHVLEVEEHDYTDLHNIFEQTLDMYRDQVEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESAKVNLTSPQVTVHLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFV
AVDFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRMIDNATDTLILRPLISHDKEHIINMARQLGTEDFAKTMPEYCGVISKNPTVKAVKAKI
EHEESQFDFDILDRVVSEARNLDIREIAEQTTQEVVAVETVDAFAANDILLDIRSPDEQD
DRPLSLEQIDIKSLPFYKLATQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFDNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcggttg
cgctttatcaaaatcctcacagggaatatccgaaacgttttaaaacagtatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgtgctcaagacgaaagccagcgc
cttattatacgtgatgccctgacgcgtatcccggggattcaccacgtcctcgaagtggaa
gaacacgactataccgatctgcacaatatcttcgagcaaacgctggacatgtaccgcgat
caggtggaaggcaaaaccttctgcgtgcgcgtcaaacggcgcggcaagcacgacttcagc
tctcaggacgtcgagcgttacgtcggcggcggcctgaaccagcacatcgagagcgcgaag
gtcaatctgacctcgccgcaggtcaccgtgcatctggaaatcgagcaggatcgcctgctg
ctgatcaaaggccgctacgaaggcatcggcggctatccgatcggtacgcaggaagatgtc
ctgtcgttgatttcgggcggcttcgactccggcgtgtccagctacatgctgatgcgccgc
ggttgccgagtgcactactgcttcttcaacctgggcggcgcggcgcatgagataggcgta
aagcaggtggcccactacttgtggaaccgcttcggcagctcgcatcgcgttcgctttgtc
gccgtcgattttgaaccggtagtcggcgaaattcttgagaaagtcgacgacggccagatg
ggcgtggtgctgaaacgcatgatggtgcgggcggcatcgaaagtggctgaacgctacggc
gtgcaggcgctggtgaccggcgaagcgctaggacaggtgtccagccagacgctgaccaac
ctgcgtatgatcgacaacgcgacggatacgttgattctgcgtccgctgatctcgcacgat
aaagaacacatcatcaatatggcgcgtcagctgggcaccgaagactttgccaagaccatg
ccggagtattgcggcgtgatctcgaagaacccaacggtcaaagcggtgaaagccaaaatc
gagcacgaagagagccagttcgacttcgatattctcgatcgcgtcgtgagcgaagcccgt
aatctggatattcgcgaaattgccgagcagaccacgcaggaagtggtggcggtcgaaacg
gtggatgcattcgccgctaacgatatcctgctggacattcgctctccggatgaacaggac
gatcgcccgctgtcgctggaacagatcgatatcaagtcgttgccgttctacaaactggcg
acccagttcggcgatctggaccagagcaaaacctatctgctctactgcgaacgcggtgtg
atgagccgtttgcaggcgctctatttgcgcgagcagggctttgataacgtgaaggtttat
cgcccctga
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