Lonsdalea populi: I6N93_05210
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Entry
I6N93_05210 CDS
T06954
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00300
Lysine biosynthesis
lpop01100
Metabolic pathways
lpop01120
Microbial metabolism in diverse environments
lpop01230
Biosynthesis of amino acids
Module
lpop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6N93_05210 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpop01002
]
I6N93_05210 (dapE)
Enzymes [BR:
lpop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
I6N93_05210 (dapE)
Peptidases and inhibitors [BR:
lpop01002
]
Metallo peptidases
Family M20
I6N93_05210 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QPQ25190
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All DBs
Position
complement(1177267..1178394)
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AA seq
375 aa
AA seq
DB search
MSCPVLELAQQLIKRPSLSPDDAGCQTLMIERLEAIGFTIEKMNFGDTQNFWAWRGTGET
LAFAGHTDVVPSGEASLWQHPPFEPTISDGMLYGRGAADMKGSLAAMVVAAERFVAANPQ
HKGRLAFLITSDEEADATHGTVKVVEALMARQERLDYCLVGEPSSTERAGDVVKNGRRGS
ITADLRIHGIQGHVAYPHLADNPVHRALPALNELASTVWDEGNEFFPPTSMQIANIKAGT
GSNNVIPGELQVQFNFRFSTELTDDTIKQRVTELLDQHQLNYTLDWRLSGQPFLTARGAL
VDAVVNAVEHYSELTPQLLTTGGTSDGRFISRMGAQVVELGPVNATIHKVDECVNAADLQ
LLSRMYQRIMERLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgccccgtcctcgaactcgctcagcagttaattaaacgcccttccctcagcccg
gacgacgccggctgccaaacgctcatgatcgaacgccttgaggccatcggctttaccatc
gaaaaaatgaatttcggtgatacgcagaacttctgggcctggcgcggaacgggcgaaacg
ctggcctttgccggacacaccgacgtggttcccagcggagaagccagtttgtggcaacat
ccgcctttcgaacccaccatcagcgacggtatgttgtatggccgtggcgcggctgatatg
aaaggatcgctggcggcgatggtcgtcgccgctgagcgcttcgtcgctgcgaatccccaa
cataaaggccgactcgcctttttgattacctcagacgaagaggctgatgcgacgcacggc
accgtcaaagtggtggaagcgctgatggcgcgtcaggagcgtctggactactgcctggtg
ggtgagccctccagcaccgagcgggctggcgatgtcgtcaagaacggtcgtcgcggctcg
attaccgccgacctgcgcattcacggtatccagggacatgtcgcctatccgcacctggcc
gacaatccggtccaccgcgcgctacccgcgttgaacgaactggcctccaccgtatgggat
gaaggcaatgaattcttcccgcccaccagtatgcagatcgccaatattaaagccggcacg
ggaagcaataacgtgatccccggcgaactgcaggtgcagttcaatttccggttcagtacc
gagttgacggacgacaccattaaacagcgcgtcaccgagctgctggaccagcatcagctg
aactatactttggactggaggttatcaggtcagccctttctgaccgctcgcggcgcgttg
gtggatgccgtagttaacgcggtcgagcactacagcgaattaaccccgcagttgctgacg
accggcggcacctcagacggacgctttatttcccgtatgggtgcgcaggtggtggaactg
gggcctgtgaacgccaccattcataaagtggacgagtgcgtcaacgcagccgatttacag
ctgctgagccgtatgtatcaacggattatggagcgactgatcgcatga
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