Lacticaseibacillus paracasei N1115: AF91_12460
Help
Entry
AF91_12460 CDS
T03050
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lpq
Lacticaseibacillus paracasei N1115
Pathway
lpq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AF91_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpq03021
]
AF91_12460
03400 DNA repair and recombination proteins [BR:
lpq03400
]
AF91_12460
Enzymes [BR:
lpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AF91_12460
Transcription machinery [BR:
lpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AF91_12460
DNA repair and recombination proteins [BR:
lpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AF91_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHJ33933
UniProt:
A0A806LGJ2
LinkDB
All DBs
Position
complement(2427906..2431505)
Genome browser
AA seq
1199 aa
AA seq
DB search
MAGHLVNYGKHRTRRSYARIKEVLDLPNLIEIQTNSYQWFLDEGLKEMFDDIMPIDDFQG
KLSLEFVGYQLLEPKYTVEEARQHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
KQGTFIINGAERVIVSQLVRSPGVYFHSETDKNSRVTYGTTVIPNRGAWLEYETDAKDIA
YVRIDRTRKIPLTELVRALGFGSDQDIINMFGDNDSLMLTLEKDVHKNTDDSRTDEALKD
IYERLRPGEPKTADSSRSLLYARFFDPKRYDLASVGRYKVNKKLSLKTRLLNQVLAETLA
DPDTGEVIAQKGTKVDRQVMDKLAPYLDRDDFKTITYQPSDQGVVTDPIELQSIKVYSQV
TPDKEINLIGNGHIGKKVKHIVPADVLASMNYFLNLQEGLGSIDDIDHLGNRRIRSVGEL
LQNQFRIGLSRMERVVRERMSIQDTATVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLASYA
VVNPYGFIETPYRRVSWDTHKVTDKIDYLTADEEDNYIVAQANSPLNDDGSFVDETVLAR
HKDNNIEISPDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLVNPHA
PLVGTGMEYKAAHDSGTAVLANNAGTVEYVDAKQIRVRREDGALDAYNLMKFKRSNAGKN
YNQRPIVTIGDHVDVDEIIADGPAMQNGELALGQNPIIAFMTWNMYNYEDAIVLSERLVK
DDVYTSIHIEEYESEARDTKLGPEEVTREIPNVGEEALKDLDEFGVVRVGAEVRDGDILV
GKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIQDVKIFTREAGDELSP
GVNMMVRVYITQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYLPDGTPVDICLSPMGVP
SRMNIGQVLELHLGMAARNLGIHVATPVFDGANDKDLWATVKEAGMASDGKSVLYDGRTG
EPFENRVSVGIMYYMKLSHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQALGLDMK
VLGADKKEIELRDMDDDEDDIVSVDALAKFAAQQEEKKAHEAAAQATDGKSANSTDDKK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacacttagtgaattatggtaagcaccggacacgccggtcctatgcccggatc
aaggaagttttggatcttcctaatctgatcgagatccaaacgaattcttaccaatggttc
ctcgatgaaggtctcaaagaaatgttcgacgatattatgccgatcgatgactttcaaggg
aaactgtcactggaatttgtcggctatcaactgctggaaccaaaatatactgttgaggaa
gcacgccaacacgatgcaaactactctgcaccgttgcatgtgaccttgcgtttaaccaac
catgaaacaggcgagattaagagccaagatgtgttctttggcgacttcccgctgatgacc
aaacaagggacgtttattattaatggtgccgaacgggtcatcgtttctcagttggtccgt
tcacctggcgtttatttccatagcgaaacagacaagaactcacgtgtcacttatggcaca
accgtgattcctaaccggggcgcctggcttgaatatgaaactgacgccaaagatatcgcg
tatgtccgaatcgatcggacacggaagattccgctgaccgaattggttcgggcgttgggc
ttcggttccgatcaagacattatcaacatgtttggtgacaatgattccttgatgcttacg
cttgaaaaagatgtgcataagaacacggatgattcccgtacggacgaagcgttgaaggat
atctacgaacgtctacgtcctggcgaaccaaaaacagccgattcatcgcggtctcttttg
tatgcccgcttcttcgacccgaagcgttatgatcttgcttcggttggtcgttacaaagtg
aataagaagctgagccttaagacccggcttttgaatcaggttttggcagaaacactggcc
gatcctgatactggtgaagtcattgcgcaaaagggcaccaaggttgatcgtcaagtgatg
gacaagttggcaccatatcttgaccgcgacgatttcaagaccatcacctaccaaccttcc
gatcaaggcgttgtcactgatccgatcgaattacagagtatcaaagtatactcacaagtg
acccctgataaagaaatcaatttgattggtaacggtcatattggtaaaaaagtgaagcac
atcgtcccagctgatgttttggcatcaatgaactacttcctgaatcttcaggaaggcttg
ggttcaattgatgacattgatcacttgggtaaccggcggattcgttccgttggtgaactg
ttgcaaaaccaattccggatcgggctttctcggatggaacgtgttgtccgtgagcggatg
tccattcaagataccgctacggtaacaccgcaacaattgatcaacattcggccagttgta
gcttctatcaaggaattcttcggcagttcccaactgtcgcagtttatggatcagacgaat
ccgcttggtgagttaacgcataagcgtcgtctgtctgctcttggacctggtgggttgacg
cgtgaccgtgccggttatgaagtccgggacgttcactacacccattatggccgtatgtgt
ccgattgaaacgcctgaaggcccgaacatcgggttgattaacagtcttgcttcttatgcg
gttgttaatccttatggttttattgaaacgccatatcgccgtgtttcttgggatacgcat
aaagttaccgacaaaatcgactatttgactgccgatgaagaagataactacatcgttgcg
caggcgaactcgcctttgaacgacgatggttcctttgttgacgaaaccgttctggctcgt
cacaaggataacaacattgaaatttctccagacaaagttgactacatggacgtttcgcct
aaacaggttgttgcggtcgcaacggcttgcattcctttcttggaaaacgatgactccaac
cgtgctttgatgggtgcgaacatgcaacgtcaggctgtgccgttggttaatccgcatgcc
ccacttgttgggactgggatggaatacaaggcagcccatgactccgggacagcggttttg
gctaataacgctggtaccgttgaatatgttgatgctaagcaaattcgggttcgtcgtgaa
gatggcgccttggatgcctacaacttgatgaaattcaagcgtagtaacgccggtaaaaac
tacaaccagcggccaatcgtgaccatcggcgatcatgttgatgttgacgaaatcatcgct
gatgggccagccatgcaaaatggtgaattagcattgggacaaaacccgatcatcgccttc
atgacttggaacatgtacaactacgaagatgcgattgtactctccgaacgactcgttaaa
gatgatgtttacacctcaatccatattgaagaatatgaatctgaagcacgtgacaccaag
cttggacctgaagaagtaacgcgtgaaattccaaacgtcggtgaagaagcccttaaggat
ctggatgaatttggtgtcgttcgtgtcggcgctgaagtgcgtgacggtgatattttggtc
ggcaaggttacacctaagggcgttactgaattgtcagctgaagaacggttactgcatgcg
atctttggtgagaaagcacgtgaagtacgtgacacctcgctgcgggttccccatggcggc
ggcgggatcattcaagacgttaagatctttactcgtgaagccggcgatgagctgtctcct
ggtgtgaatatgatggtccgcgtttatattacgcagaagcggaagattcaggtcggtgat
aagatggccggtcgtcacgggaacaaagggacggtttccgtcgttgtgcctgaagaggac
atgccatacttgccagacggtaccccagttgacatctgcttgtcaccaatgggtgtgcca
agtcgtatgaacatcggacaggtgctggaattgcatctggggatggctgcacgtaacttg
ggcattcatgttgcaacgcctgttttcgatggcgccaacgataaagatctgtgggcaacc
gttaaggaagccggtatggcatctgatggtaagtctgtcttgtatgacggtcgaactggt
gaaccattcgaaaaccgtgtttctgtcggaatcatgtactacatgaaactgtctcacatg
gttgacgataagattcatgctcgttccattggaccttacagtttagttacccaacagcca
cttggtggtaaagctcagtttggtggtcagcgttttggtgaaatggaagtttgggccctt
gaagcttatggcgcggcttatactttgcaggaaatcctgacttacaagtccgatgacgtg
gttggccgggttaagacctatgaagccatcgttaagggcgaaccgattcctaagccgggt
gtaccagaatccttccgtgtgcttgtcaaagaattgcaagcactgggtctggatatgaag
gtccttggcgcggataaaaaagaaattgaactgcgggacatggacgacgacgaggatgac
attgtttctgtcgatgccttggcgaagtttgctgctcagcaggaagaaaagaaggctcac
gaagccgcagcacaagcaactgacggtaagtctgccaacagtaccgacgataagaaatag
DBGET
integrated database retrieval system
