Limnobaculum parvum: HYN51_02440
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Entry
HYN51_02440 CDS
T05491
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
lpv
Limnobaculum parvum
Pathway
lpv00541
Biosynthesis of various nucleotide sugars
lpv01100
Metabolic pathways
lpv01250
Biosynthesis of nucleotide sugars
Module
lpv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYN51_02440
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lpv01005
]
HYN51_02440
Enzymes [BR:
lpv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HYN51_02440
Lipopolysaccharide biosynthesis proteins [BR:
lpv01005
]
Lipid A
HYN51_02440
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
AWH87521
UniProt:
A0A2Y9TVB5
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Position
complement(2023689..2024543)
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AA seq
284 aa
AA seq
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MSQKVVKIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHESWQAQPVADVVDVIQLPAFLAR
QTDLVEAMARTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKQATGGHPVIFDVTHALQCRDPFGAASGGRRAQVAELARSGMAIGIAGLFIEA
HPDPAHAKCDGPSALPLDKLEPFLAQMKAIDELVKRFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaagtggttaagattggtgacatcaaggtagctaacgacctgccatttgtc
ctgtttggcggtatgaacgtgctggagtcacgggatctggcgatgcgtatttgtgagcat
tacgttaccgttacgcaaaagttaggcattccttatgtctttaaggcctcttttgacaaa
gccaatcgctcttctattcactcttaccgtgggcctggcctagaagagggaatgaaaatt
ttccaagagctaaaacagacatttggtgtaaaaatcattaccgatgtgcacgaaagctgg
caggctcaaccggtagccgatgtggttgacgtcatccagttaccggcattcctagcccgt
cagaccgatctggtggaagctatggcgcgtaccggcgccgttattaacgttaaaaaacct
cagtttgttagcccaggtcagatggggaatattgtcgataaattcaaagaaggcggtaac
gatcaggttattctttgcgatcgcggtagtaactttggttatgacaatctggtcgtggat
atgctgggctttaacgtgatgaagcaagcaaccggcggtcatccagtgatttttgacgta
acccatgccttacagtgccgtgacccatttggtgccgcatcgggtgggcgtcgtgctcag
gttgcagaactggctcgttctggtatggcgattggtattgccggtttgttcattgaagcg
catcccgatcctgcacatgctaagtgcgatggcccttcagcgctgcctttggataagcta
gaaccgtttctagcacagatgaaagccattgatgagctggttaagcgttttccggagctg
gacaccagtaaataa
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