Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1295
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Entry
LRHK_1295 CDS
T01961
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LRHK_1295 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lra03016
]
LRHK_1295 (trmU)
Enzymes [BR:
lra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
LRHK_1295 (trmU)
Transfer RNA biogenesis [BR:
lra03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LRHK_1295 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Arginosuc_synth
Asn_synthase
ATP_bind_3
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
AER64080
LinkDB
All DBs
Position
1236340..1237473
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AA seq
377 aa
AA seq
DB search
MMVIVLDNSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVCTATTDY
EDVAKVASEIGIPYYSINFEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYA
EQLNADYIAMGHYAQVKTDEQGVVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQK
PEVRKIAEAAGLATAKKKDSTGICFIGERNFKQFLSTYLPAQPGKMMTVDGVEKGTHDGL
MYYTIGQRQGLGIGGNSQNSEPWFVVGKDLDKNILYVGQGFDNPALMATSLSASNLNWTT
GEAPADGTHMTAKFRYRQRDTGVTIHYHDDGTATVDFDVPVRAITPGQAVVFYDGEECLG
GGTIDAAYAHTNELQYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgattgttttggacaattccaacacccgtgttgttgttggcatgtccggcggc
gttgattcaagcgtcacggcattattgctgaagcaacaaggatatgatgttgtcggtgtc
ttcatgaaaaactgggatgacactgatgaaaatggtgtttgtacggccaccacggactat
gaggacgttgctaaggtggctagtgagataggcattccttattattcgattaatttcgaa
aaggaatactgggatcgcgtttttcaatatttccttgacgagtacaaggctgggcgcaca
ccaaacccggacgtgatgtgcaacaaggaaatcaagttcaaggcatttttggattatgcc
gagcagctgaatgcggattacattgcaatggggcactatgcgcaggttaaaaccgatgag
cagggcgttgttcatatgttgcgaggcgcggacggtaataaggatcaaacgtacttctta
agtcagctttcccaggatcagctcaagaagtcgatgtttccaatcggtcatttgcagaag
ccggaagtgcgcaagattgccgaggcagctggattggcaactgccaagaagaaggactca
accgggatttgctttatcggtgagcgtaacttcaagcagttcctcagcacctatcttccg
gctcaacccggaaagatgatgacagtggatggcgttgagaaaggcacccacgacggcttg
atgtattatacaatcggtcaacgtcaaggcttgggcatcggcggtaactcgcaaaactcc
gagccttggtttgtggttggcaaggatttagacaaaaacatcttgtatgttggtcagggt
tttgacaacccggcgttgatggccacaagtctcagtgcatcgaaccttaattggaccacc
ggcgaggctccggctgatggcacgcatatgacagctaagtttcgttaccggcagcgtgat
accggcgtgacgattcactatcatgatgacggaacggcgactgtcgactttgatgtaccg
gttcgagccattacgcccggtcaggcagtggtcttctatgatggcgaggagtgtttaggc
ggcggtacgattgatgcagcctatgctcatactaatgagttgcagtatgtttag
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