Lolium rigidum (rigid ryegrass): 124654678
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Entry
124654678 CDS
T09103
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00300
Lysine biosynthesis
lrd00470
D-Amino acid metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
lrd01230
Biosynthesis of amino acids
Module
lrd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
124654678
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
124654678
Enzymes [BR:
lrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
124654678
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Motif
Other DBs
NCBI-GeneID:
124654678
NCBI-ProteinID:
XP_047049628
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All DBs
Position
5:192575928..192581950
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AA seq
489 aa
AA seq
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MAAANLLSRSLLSSPTPTHVSQPTRSSPASVSLRRRHARATPLRASLSTASPSLQPPPAA
AAGEAPKHCFRRGADGHLYCEGVRVEDAMAAAERSPFYLYSRPQVVRNFTAYNQALEGLR
SVVGYAVKANNNLSVLRLLRDLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLV
LAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGI
RNEKLQWFLDSIKSYSNDIKLVGVHCHLGSTITKVDIFRDAAVIMVNFVDQIREQGFELE
YLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNKVT
GVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPPSPDAEVATFDIVGPVCESADFL
GKDRELPTPEKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVDDDGSIAKIRHGETFDDY
MKFFDGLSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacctgctctcccgctcgctcctctcctcgcccaccccgacccacgtc
tcccaaccaacccgcagcagccccgcatccgtctccctgcgccgccgccatgcacgcgcg
acccccctccgcgcctccctctccaccgcctccccgtccctgcagccgccgccggcggcc
gccgcgggggaggcgcccaagcactgcttccggcgcggcgccgacgggcacctctactgc
gagggggtccgggtggaggacgcgatggcggcggcagagcggagccccttctacctctac
agcaggccgcaggtcgtccgcaacttcaccgcctacaaccaggccctcgagggcctccgc
tccgtcgtcgggtacgccgtcaaggccaacaacaacctcagcgtgctgcgtctcctgcgg
gacctcgggtgcggcgccgtccttgtcagcggcaacgagctccgcctcgcactgcgggca
ggatttgaccccaccaggtgcatatttaatggaaatggaaaaacattggaagatcttgtt
ttagctgctgagagtggagtatttgtaaatatagacagtgaatttgatttggagaatatt
gttactgctgcaagagttgcaggaaagaaagtgcctgttttgctcagaattaatccggat
gtcgatccacaggttcatccctatgttgccactggaaacaaaacatccaaatttgggatc
cgtaatgaaaaattgcaatggttcttagactctatcaagtcatactcaaatgatattaaa
ctggtgggtgttcactgccatcttggatccactattacaaaggttgatatatttagggac
gctgcagttattatggtgaacttcgttgatcaaattcgagaacaaggttttgagttggaa
tacctgaatatcggagggggcttgggaatagactaccatcacacagatgcagtcttgcct
acgcctatggaccttatcaacacagtgcgagaattggttctctcacgggatcttactctc
atcatcgaacctggaagatcccttattgctaatacttgctgcttcgtcaacaaggtcact
ggtgtgaaatctaatggtacaaagaatttcattgtcgttgatggcagcatggcagagctc
attaggccaagtttatatggcgcatatcagcatatcgaactagtttctcctccctcccca
gacgctgaagtagcgacctttgatattgttgggccagtttgtgaatctgcggatttcctt
ggcaaagatagggagcttccaacacctgaaaagggagctggtttggttgtccacgacgca
ggggcctactgcatgagtatggcttcgacatacaacctgaaaatgagaccagccgagtat
tgggtagatgatgacggatccattgctaaaattaggcacggggaaacatttgacgactac
atgaagttcttcgatggtctctctgcgtag
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