Lolium rigidum (rigid ryegrass): 124665137
Help
Entry
124665137 CDS
T09103
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124665137
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP100
124665137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
ATPase_2
AAA_14
nSTAND3
bpMoxR
IstB_IS21
AAA_7
TniB
AAA_28
TsaE
NACHT
DUF815
RNA_helicase
NBD_SMAX1
Zeta_toxin
AAA_19
AAA_25
Mg_chelatase
ABC_tran
ResIII
DNA_pol3_delta2
T2SSE
DUF2987
DASH_Spc19
DUF4426
FapA
Motif
Other DBs
NCBI-GeneID:
124665137
NCBI-ProteinID:
XP_047058494
LinkDB
All DBs
Position
6:108247950..108251253
Genome browser
AA seq
913 aa
AA seq
DB search
MNPEKFTHKTNEALVAAQEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHGSAGNDSA
AESFERVVAAALKRLPSQSPPPDTIPASTSLIKAVRRAQSAQKSRGDSHLAVDQLLIGLL
EDSQISDALKEAGVSAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY
EGHHGVRIQDRALVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQ
RREELQFTLQEAERRMDLARVADLRYGALQEIDTAIAKLEGETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRVDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARLQ
MKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIREEI
DENSTVYVDASLGKEELTYRVDKNGGVVNAQTGQKSDILIQVPSGAVGSDATQAVKRMKI
SQDGGDVDDMEEE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggagaagttcacgcacaagaccaatgaggcgctcgtggcggcgcaggagatg
gcgtcggaggccggccacgcgcagctcacgccgctgcacctcgcggcggcgctggcggca
gacaggtccggcatcctccggcaggccatcgcccacggctccgccggcaacgactccgcg
gccgaatcgttcgagcgcgtggtcgccgctgctctcaagaggcttccatcccagtccccg
ccgccggacaccatcccggcgtccacctcgctgatcaaggccgtccgccgcgcgcagtcg
gcgcagaagtcgcgcggcgactcccacctcgccgtcgaccagctgctcatcggcctcctc
gaggactcgcagatctcggacgcgctgaaggaggccggcgtgtccgcggcgcgggtgaag
gccgaggtcgagaagctccggggaggcgacaaccggcgcgtcgaatccgcgtcgggggac
accaacttccaggccctcaagacctacggccgggacctcgtcgaggtggcgggcaagctc
gacccagtcatcggccgcgacgaggagatccgccgcgtggtgcggatcctgtcgcggcgc
accaagaacaaccccgtcctcatcggcgagcccggcgtcggcaagaccgccgtcgtggag
gggctcgcgcagcgcatcgtgcgcggcgatgtgccgagcaacctcctggacgtgcggctc
gtggcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgaggcgaattcgaggag
cggctcaaggccgtgctcaaggaggtggaggaggccgaggggaaggtgatactgttcatc
gacgagatccacctcgtgctgggcgccgggaggacggaggggtccatggacgccgccaac
ctgttcaagccaatgctcgcgagggggcagcttcggtgcattggcgcgacaacgctggag
gagtacaggaagtacgtcgagaaggacgcggcgtttgagcggcggttccagcaagttttc
gtggccgagcccagtgtccccgacactgtcagtattctgagagggctcaaggagaagtac
gaggggcatcatggtgtaagaattcaggatcgtgcactggtcgtcgccgcgcagctctcg
tccagatacatcatgggtcgtcatctgcccgataaagcaatcgatttagttgatgaggca
tgcgcaaatgtgagggtgcagcttgacagccagcctgaagagattgacaacctcgagagg
aagagaattcagctggaagtcgagcttcatgccctcgagaaggagaaggacaaagctagc
aaagctcggctagttgaggtcaggaaagagctggacgatctgagggacaagctgcagccc
ctgcagatgaagtatcgcaaggagaaagagagaatagatgagatcaggtccctgaagcaa
cgtcgtgaagagctgcagttcactctgcaagaggccgagcgtaggatggatttggcccgt
gttgccgacctcagatatggtgctctgcaagagattgacactgccattgccaagctagag
ggtgagactggtgagaacttgatgttaactgagacggtcggcccagagcagattgctgag
gtcgtgagccgctggacgggcattcctgttactaggcttggacaaaatgagaaggcgagg
ctgattgggctcgctgatagactgcatcagagggtggtcggacagtatgaagctgtcaat
gcagttggagaggccgttctgaggtcgagggctggtcttggacggccacagcagcctact
ggttctttcctcttccttggaccaacaggtgttggtaaaacggagctcgccaaggctctt
gctgagcagctgtttgatgatgagaacctgcttgtccgcgttgatatgtctgaatacatg
gagcagcattcagttgcccggctaatcggagctccacctggttatgttggtcatgaggaa
ggaggccaactgaccgagcaagtgcggaggaggccatacagtgtcatcctcttcgatgag
gtcgagaaggcacatgtggcagtattcaacactctgctccaggttcttgatgatgggagg
ctaactgacgggcaaggcaggacggttgacttcaggaataccgtgatcatcatgacttcg
aacctcggcgcggagcacctcctcgccggaatggtggggaactcaatgaaggttgctcgt
gatctggtcatgcaggaggtgaggaggcatttccgtccggagctattgaatcgtctagat
gagattgtgatcttcgaccctctgtcgcacgagcaactgcggaaggttgctaggcttcag
atgaaagatgtggcagtgcgacttgcagaaaggggcgttgctttggccgtgactgacgct
gccctggatgtcatcctgtcactctcttacgatccggtatacggcgctaggccgattagg
agatggatcgagaagaggattgtcaccgagctctcgaagatgttgatccgcgaagagatc
gatgagaactccacggtgtacgtcgatgcttctctgggaaaggaagagctgacatatagg
gtcgacaagaatggaggagtggtgaacgcgcagacgggccagaaatctgatatcctcatc
caagtgcccagtggagctgtcgggagcgatgcgacgcaagccgtcaaaaggatgaagatt
tctcaggacggtggagatgtggatgacatggaagaagagtag
DBGET
integrated database retrieval system