KEGG   Lolium rigidum (rigid ryegrass): 124667007
Entry
124667007         CDS       T09103                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124667007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124667007
Spliceosome [BR:lrd03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124667007
 Complex B
    124667007
 Complex C
   U2 SnRNP specific factors
    124667007
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Drc1-Sld2 Desulfoferrod_N
Other DBs
NCBI-GeneID: 124667007
NCBI-ProteinID: XP_047060298
LinkDB
Position
6:complement(138627960..138634902)
AA seq 508 aa
MASSVLEATRAAHEDLERLERLAVRELQRDPANARDRLFQSHRVRNIIDLLVTTSDRLVE
IYEDKDGARKEEISNHLTAPAQDDIFHKFFDRLKDIRESHRRNHSARFVSDADDHEELLK
EEPAIEFSGEEAFGRYLDLHELYNEFINSKFGSLMEYSAYVGTFSQTEKITHSLKATRQY
KEYLEHILEYLTYFLRRTEPLQDLQKIFTKLESDFEEQWANGEVPGWENRGTEKESVLQE
SEVDLDYYNSVEELVELGPEKLKEALAARGLKGGGTVQQRAERLFLLKHTPLEQLDRKHF
VKGSRSSVSNVPSNGNNSKDDLKKEIALIEVKMRRLCEILDEIIVRTKENAEKKLTLTYE
EMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN
HSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKALWERIQSKQGLNKWRP
DLEEEYEDTDGNIYNKKTYTDLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggtgctggaggccacgcgggcggcgcacgaggacctggagcggctcgag
cgcctggcggtgcgcgagctgcagcgcgaccccgccaacgcgcgcgaccgcctcttccag
tcccaccgcgtccgcaacatcatcgacctcctcgtcaccacctccgacaggctcgtggaa
atctacgaagacaaggacggtgctaggaaggaagagatctccaaccatttgactgctcca
gcacaagacgacatcttccacaagttctttgacaggctcaaagatatccgtgaatcccat
aggcggaatcactccgctcgttttgtcagtgatgctgacgatcatgaagagctactaaag
gaggaaccagctattgaattctctggcgaggaagcatttggtcggtacctggacttgcat
gagctctacaacgagttcataaattccaagtttggatcgctcatggaatactcggcatat
gttggcactttttctcagacggagaagatcacacatagtctaaaagctaccaggcaatac
aaagaatatttggagcatattttggaatatctgacatattttctgcgtcgcacagagcca
ttgcaagatcttcagaagatatttacaaagttggaaagtgattttgaagaacagtgggcc
aatggagaagtacctggctgggaaaataggggcacagaaaaagaatctgtgctgcaagag
tctgaagtagaccttgattactataactctgttgaagaacttgtagagcttggtccggaa
aagttgaaagaggctttagctgctcgtggattgaaaggcggtggcactgttcaacagcgt
gcagagcgactcttcttgctgaagcatacaccattggaacaattggaccgtaagcatttt
gtaaaaggttcacgtagttctgtctcaaatgtgccttctaatggcaacaattccaaggat
gatttgaagaaggaaattgccttgatcgaagtaaagatgaggcgcctgtgtgagattctt
gatgagatcattgtaagaacaaaggaaaatgccgagaagaaactgactttgacctatgaa
gaaatggaagcagaacgagaagaggaagaagtacaagctgatagtgaaagtgatgacgaa
gaccaacaaatctacaaccctctcaagttaccaatgggctgggatggaaaacctatcccc
tattggctctataagcttcacggtcttggtcaggaattcaagtgcgagatatgtggcaac
cacagttactgggggagaagggcttatgagcgccatttcaaggagtggcgccaccagcat
gggatgcgatgccttggtattcctaataccaagaacttcaatgaaatcacatccatcgag
gaggccaaggcactctgggagagaatacaatcaaagcaagggctgaacaagtggcggcca
gacttggaagaagagtacgaggatacagatggcaatatctacaataagaagacttacact
gacctgcagcggcaaggcctgatatag

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