Lolium rigidum (rigid ryegrass): 124684945
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Entry
124684945 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124684945
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124684945
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124684945
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124684945
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124684945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
124684945
NCBI-ProteinID:
XP_047075163
LinkDB
All DBs
Position
1:170926452..170932063
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AA seq
290 aa
AA seq
DB search
MSQTKEVRYTARSITPPANRSGTSKSPPPVRRSSSRSPSPKRSTSKSPPPRRRSTSRSPP
RRRGRSRSRDRSRSRDRSDDDLRNPGNNLFVTGLSTRVTEAELEKFFSKEGKVKNCHVVL
DPRSKESRGFAFVSMDTVEDARRCIKRLHRTVLEGRLVTVEKAKRTRERTPTPGKYCGQR
GSQKRSRSPSPRRPRRRERSRSRDRKRERSRSRDRRKHRSRSRSRDRRRDRSRSRDRSRK
DRSRSRDRRSRRDRSRSRDRRGNSPHERDSHRSRRDRSRSPTSNGNRKTD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacgaaggaagtgaggtacactgcacggtccattacaccccctgcaaataga
agtggcacttcaaagtcacctcctccagtgagacgtagctcttcaagatcaccttctcca
aagaggagtacctcaaagtctccgcctccaaggaggcgtagcacttcaaggtctcctcct
agaagacgtggtagatcaaggtcaagggataggagtcgttccagggataggagtgatgat
gatttaagaaatcctgggaataacctttttgttactgggttgtccacacgtgtaactgaa
gctgaacttgagaagttctttagcaaggaaggaaaggttaaaaactgtcatgttgttctt
gatcctcgttcgaaagaatctcggggctttgcatttgtgagtatggatactgttgaggat
gcaagacgctgcatcaagcgcctacaccgtactgtacttgaaggccgcctggtcactgta
gagaaggctaaaagaactcgggagagaactcctactcctggaaaatactgcggccaaaga
ggttctcaaaagcgctctaggagcccttcacctcgccggcctcgtagaagggagcgttcc
cgctcaagggaccgcaaaagagagcggtcccgctcaagggatcgcaggaagcaccggtcg
cgctcacgctcgagagatcgccgcagggaccgctcacgttcaagggatcgcagccgcaag
gaccgttcacggtcaagggatcgtcgcagccgcagggaccgctcacgctcgagggatcgc
aggggcaactcgccacatgaaagagattctcatagaagccgcagagatcggtccaggtca
ccaaccagcaatgggaaccgcaaaactgactag
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