Lolium rigidum (rigid ryegrass): 124688380
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Entry
124688380 CDS
T09103
Name
(RefSeq) DNA damage-binding protein cmr1-like
KO
K24755
WD repeat-containing protein 76
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124688380
03036 Chromosome and associated proteins [BR:
lrd03036
]
124688380
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124688380
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124688380
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124688380
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
124688380
DSBR (double strand breaks repair)
Other DSBR factors
Others
124688380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
124688380
NCBI-ProteinID:
XP_047078023
LinkDB
All DBs
Position
2:complement(238537257..238540168)
Genome browser
AA seq
437 aa
AA seq
DB search
MASPPEVDLAEYERLRAENIRLKEIILASARRKADDLSPAIKSSEPPAARRRTIRLSQSP
PDAQPAPPTPTPTPMPRSTTFSSSLASAILDAVSLSPGAAKIRADEFDARKELVLRPANT
RKLLPNRIPALLVLPLVDRTVVAAGNILGNVGFWHADREPGVAETDGAFEYLPHQGPVAA
IVAHPALPQKIYSCSHGGEICHMDAEKESFNIIHSCDYPVYSLCQAPDSASCLYFGGANG
TLKLFDERMGKVSTTWDSHDNAVNSIDFHPEKKHMLATSSTDKTARVWDLRRLEKNNKDC
LKVLQHDSSVQSAYFSPSGRMLATTSLDDTVRVFEGDDFDSSHIINHNNQTGRWISSFKA
IWGWNDRDLFIGNMKRAIDVISVGSSSDGGGLISASRSACLQSQHMTTIPCRLSAHPYKV
GHLACASSGSVFLWTRA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccgccggaagttgatctcgccgagtacgagcgcctccgtgcggagaacatc
cgcctcaaagagatcatcctcgcctccgcccgccgcaaggccgacgatctctcacccgcc
atcaagtcctccgagcctcccgccgcgcgccgccgcaccatccgcctctctcaatcccct
cccgacgcccagcccgcccctcccacgcccactccaacgccgatgcctcgcagcaccacc
ttctcctcctcgctcgcatccgccatcctcgatgccgtctcgctttcaccaggggctgcc
aagatccgtgccgacgagttcgatgcccggaaggagctcgtgctgaggcctgccaatacg
aggaagctgctgcccaacaggataccggcactcctggtcctgccgctggtcgaccggaca
gtggtggcggcggggaacatcttggggaatgttgggttctggcacgccgaccgggaacct
ggcgtggcggagacagatggggcgttcgagtatttgccccaccagggtcctgtggcagca
atcgtggcacacccggccctgccacagaagatctacagttgcagccatgggggtgaaatt
tgtcatatggacgctgagaaggagagctttaatattatccactcgtgtgactatcctgtt
tattcactctgtcaagcgccggacagtgctagctgcctctatttcggtggcgcgaatggt
acactgaaactctttgatgagcggatgggtaaggtatcaaccacatgggattcacatgac
aatgcagtcaactcgatagattttcatccagagaagaaacatatgcttgccacaagttca
acagataaaacagcacgtgtgtgggatcttagaaggctcgagaagaataacaaagattgt
ttgaaggttctccaacatgattcttctgttcagtcggcttatttctcacctagtggccgc
atgctagcaacaacaagccttgacgataccgtcagagtctttgaaggggatgactttgat
agctcgcacattatcaatcataataaccagacaggacgctggatttcttcattcaaggca
atctggggttggaacgacagggacctgtttattggaaacatgaagcgggcgatagatgtc
atctcggttggtagcagcagcgatggtggtggcctcatctcggcttcgcgcagcgcgtgc
ctccagagccagcacatgacgaccattccttgcaggttgtccgcacatccatacaaagtt
ggccatcttgcctgcgcgagctctggcagcgtgttcctttggaccagggcttga
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