Lolium rigidum (rigid ryegrass): 124688509
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Entry
124688509 CDS
T09103
Name
(RefSeq) DNA repair and recombination protein RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124688509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124688509
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124688509
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
124688509
NCBI-ProteinID:
XP_047078135
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All DBs
Position
2:complement(249949528..249961329)
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AA seq
971 aa
AA seq
DB search
MPSRTRCGGRGGDADGDDEVVTVSSDPDESESEPERGAEADDDDDDEYVADSSDGGGVED
EAEEGGDSDNGDGGPLLRRGRRGVEEPDEERKSQNVDALVRGNLIVRRQPLIPRILSVSD
AAAIARKPFKPPCENGYGESSEHLARRLSARKRFVPWGSAQPFACAVINNLPQSPFIASD
DSSEKEEPLPPGIEPLILWQPEGCDKENNNFTAIEVDHLLVRYLRPHQREGVQFMFDCVA
GLLSDDGIAGCILADDMGLGKTLQSITLLYTLLAQGFDGKPMVKRAVIVTPTSLVSNWEA
EISKWLKGKVHLLALCESTRADVLSGIGSFLKPLSRLQVLIISYETFRMHSSKFEIPGSC
DLLICDEAHRLKNDQTLTNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDA
AYFRRHYEAPIIRGREPTATAEEKKLGSERSGELSAKVNQFILRRTNALLSNHLPPKIVE
VVCCKLSPLQMTLYNHFIHSKNVKRLISEQAKQSKVLAYITALKKLCNHPKLIYDTIKSN
KSGGSDFDDCLRFFPPELFQGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVL
VSNYTQTLDLFAQLCRERRYPYVRLDGSTSINKRQKLVNQFNDLSRDEFVFLLSSKAGGC
GLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSK
EGLQKVIQQEQASDKVQDQGNSLSTEDLRDLFTFHEQVRSEIHENLKCNRCNKNDHMLLD
GNGSNLAATEHKTVSTSTERIYTDIGGFGEISGCVQKMNSSNQQIEQPSEEDLGSWGHHS
DPSTVPDTILQCSAGDEVSFVFTNQIDGKLVPVESMVRLTTHQPNGMAASGQKEVPKISS
PMKPGRQSLLGKNLKMMGFNLKNSSLKCPTKPKRPSPICLQTLNKTNPSSDHQPQNKRLH
VASDISDDDFV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaggaccaggtgcggcggccgcggcggcgatgccgacggcgacgacgaggtc
gtcaccgtctcctccgaccccgacgagtcggagtccgagccggagcgcggggcggaggcg
gacgacgacgacgacgacgagtacgtggcggacagcagcgacgggggcggcgtcgaggac
gaagccgaggaagggggcgacagcgataacggcgacggcgggccgctacttcggcgcggg
cggcgcggggtcgaggagcccgacgaggagaggaaatcgcagaacgtggacgcgctcgtc
aggggaaatctgattgtaagaaggcagccacttattccgcgtatcctttcagtttctgat
gcggcagcgatagctcgaaaaccattcaaacctccatgcgaaaatggatatggtgaaagt
agtgagcatcttgctcggcgcctttcagcccgtaaaagatttgtcccatggggttcagcg
cagccatttgcatgtgcagttataaacaatcttccgcaatcaccttttattgctagtgat
gattcatcagaaaaggaggaacctcttccacctggcatagagccattaattttgtggcaa
cccgagggatgtgataaggagaataacaattttacggctatagaagttgatcatttgctt
gtacgctaccttcgccctcatcaaagggagggagttcaatttatgtttgattgtgtcgct
gggttgctaagtgatgatggtatcgctggatgcattttagctgatgacatgggattgggg
aagactttacagtcaataactttactctatacccttctggctcaaggctttgatggtaag
ccgatggttaaaagggctgtcattgtgacccctacaagcctagttagcaactgggaggct
gagataagtaaatggttaaagggaaaagtgcatctgcttgccctctgtgaaagcacacgt
gctgatgttctttctggaatagggagtttcttaaagcccttgagccgtcttcaggtactt
atcatatcttatgagaccttccgcatgcattcgtcaaaatttgaaataccaggaagctgt
gatcttctcatatgtgatgaggctcacaggctgaaaaatgaccagactttaacaaataag
gctttggccgcccttccttgtacacggcgtatcctgttgtcaggtaccccaatgcagaat
gatctggaagagttcttttcaatggtaaattttacaaatccaggagttctaggggatgct
gcatattttcgccgacattatgaagcaccaataattcgcggaagagaacccacagcaact
gcagaagaaaagaagttgggatccgagagatctggagagcttagtgcaaaagtaaatcag
tttatattgagaagaacgaatgccctgttgtccaatcacttgccacccaagattgttgaa
gtagtgtgctgcaagctaagtcccttgcagatgacattgtacaaccatttcatacattcc
aaaaatgttaaacgcttgatctctgaacaagcaaagcaatctaaagttttggcatatatt
actgctcttaagaaattgtgcaaccatcctaagctaatctatgacaccataaaaagtaac
aagtcgggaggctccgattttgatgactgtctacgctttttccctccagaattgtttcaa
ggaagatctggatcatggactggtggaggaggaatgtgggtagaactatctggcaaaatg
catgtgttggctagattgctggggcacctccgactgaaaactgatgaccgtattgtcctt
gtatcaaattatactcagacattagatttatttgcacaactgtgtcgggaaagaagatac
ccatacgttagacttgatggttcaacatccattaataaaaggcaaaagttggtgaaccaa
ttcaatgatctatctagagatgagtttgtttttctacttagtagcaaggcaggtggttgt
gggcttaatttggtgggtggaaatcgattggttctctttgaccccgattggaaccctgcc
aacgataagcaggctgctgctagagtatggcgagatggacaaaagaagagagtgtacata
tacaggttcttgagcactggaaccatcgaggagaaggtatatcagcgccaaatgtcaaaa
gaaggcctccagaaagttattcagcaggaacaagccagcgacaaagtgcaggatcaggga
aattctctttcaaccgaggatctacgtgatctgtttacttttcatgaacaagtcaggtct
gaaatacatgaaaatttgaagtgcaaccgctgtaacaagaatgaccatatgctgttagat
ggtaatggttcgaatttagctgccactgagcacaagacagtttcaacatcaacagaaaga
atctatactgatattggtggatttggagagatctctggatgcgtgcagaaaatgaatagt
tcaaatcaacagattgaacaaccttctgaagaagatttaggaagttggggccatcattct
gatccatcaactgtacctgatactatactccagtgttctgctggtgacgaggtttcattt
gttttcaccaatcagattgatgggaaacttgttccagttgaatctatggtgcgattgaca
actcatcaaccaaatggaatggcagctagtgggcaaaaagaagtgccgaaaataagttcg
ccaatgaaacctggaaggcaatctttacttggcaagaatttgaagatgatgggattcaat
ctgaagaattcatctttgaaatgtccaactaaacccaagagaccatctccaatttgcttg
caaacgttgaataaaaccaacccctcatcagatcatcaaccgcagaataaaagacttcat
gttgcttctgatatatctgatgatgattttgtttga
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