Lolium rigidum (rigid ryegrass): 124688687
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Entry
124688687 CDS
T09103
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124688687
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124688687
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
124688687
NCBI-ProteinID:
XP_047078284
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Position
2:263393735..263394871
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AA seq
378 aa
AA seq
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MAPKGLLILPVALLVFLVQVAAANPHHENVIDRCWRGRGNWAANRQRLAVCSVGFAGKMR
QNRGAGVTPYTVTDPSDDPVRPRPGTLRYGATVLPGKVWITFQRDMHIRLAQPLFVKSFT
AIDGRGADVHIAGGAGIVLYEVNNVIIHGLQVHDVRAQPAGRVLRPGGAVQTVDVGDGDA
IRLVTSSKVWIDHNTLSRCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDGQLTDRR
MRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNFYDGWRDYAIGGSMGPSVKSQGNLFIAST
PDSSNVTRRMPAGDAAGKEWHWHSVGDSFENGAFFQQMGSRVRPNYNRHQAFPAASSSVV
RSLTKDAGALRCSARSAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaaggattactcatcctccccgtcgccctcctcgtcttcctcgtccaagtc
gccgccgcgaacccccaccatgagaacgtcatcgaccggtgctggcgtgggcgaggcaac
tgggcagccaaccgccagcggctcgccgtctgctccgtaggcttcgcggggaagatgcgg
cagaaccgtggcgccggagtgaccccgtacacggtcaccgacccaagcgacgaccccgtg
cgcccccggcccggcacgctacggtacggcgcgacggtgctgccggggaaggtctggatc
accttccagcgggacatgcacatccggctggcgcagccgctcttcgtcaagagcttcact
gccatcgacggccgcggcgcggacgtgcatatcgccggaggcgccggcatcgtgctctac
gaggtgaacaacgtgatcatccacgggctccaggtgcacgacgtccgcgcgcagcccgcg
gggcgcgtgttgcgcccgggcggcgccgtgcagaccgtcgacgtcggagatggcgacgcg
atccggctggtgacgagctccaaggtgtggatcgaccacaacacgctgtcccggtgcgag
gacggcctcctggacgtgacgctggggtccaccgacgtgaccgtctccaacaactggttc
cacgaccacgacaaggtcatgctgctggggcacgacgacggccagctcaccgaccgccgg
atgcgggtcaccgtcgcgttcaaccgcttcggccccaacgtcaaccagcgcatgccgagg
atcaggcacggctacgcacacgtcgtcaacaacttttacgatgggtggagggactacgcc
atcggagggagcatggggccgagcgtcaagagccagggcaacctgttcatcgcctccacg
ccggacagctccaatgtaacgcgaaggatgccggccggagatgccgcggggaaggagtgg
cattggcactccgtgggggactcgttcgagaacggcgccttcttccagcagatgggcagc
agggtgcggccgaattacaacaggcatcaggcgttcccggcagcgagctcgagcgtggtg
cggtctctgaccaaggacgctggtgctctgaggtgctccgccaggtccgcctgctga
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