Lolium rigidum (rigid ryegrass): 124693452
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Entry
124693452 CDS
T09103
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124693452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124693452
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124693452
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RAG1_imp_bd
ERCC3_RAD25_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124693452
NCBI-ProteinID:
XP_047082884
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Position
2:273304038..273312399
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AA seq
957 aa
AA seq
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MDAAPSEDSPAASSGMYYRRKKKAPDPVGALSLPAASMGRIWGCGSVSKEVESSYARRLQ
LLSFLSTTLPDPTGSHVAGAATNSTESPVSQEQGNSKVVINLDSDDEDESIAACKQPAPE
KSNQLTPEENKLLMPSEHAGTLTTWLATEANDEPSETKRDGDGGQTSQIVPYCQSAAIVN
QYPLPSYQPSVQFERVILQRRPEEERIQDLAVATRVEKIAETQVFPALPKERKQKKIDPS
SQLDGDAETTPRKRKGKNNANPAVLGFPSETCNPVEEDEPMEEDEPMEEEDKSEKESDGL
EDFWNDFSLAVESSKLDTVEEVANEKEVGEKEVDTDCNHDIQIHDDLGHVCRVCGMIVRR
ADTIIDYQWKKASRSRSYFSETRSKDPDEIVIGDVRVAEELLVLDIAIHPRHAKQMRPHQ
LAGFHFLVKNLVSDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVILPKGILGT
WKREFQQWQVEDIPLYDFYSVKADKRTDQLEILKAWQAKLSILLVGYKQFSRIICSDGGG
TVAAACRDMLLQVPNLLIMDEGHTPRNRETDVLESLSRVLTPRKVVLSGTLFQNHVSEVF
NILNLVRPKFLKTESSRPIVKRIMSQVAISGGRISKPGADNAFTDSVEHTLMVHDENFTR
KAHVIRSLRELTKDVLHYYKGDILDDLPGLVDFSVFLKLAPKQKELVHKLGAYEIFKKGA
VGTALYMHPCLSEMSEAAAAERAVNDATIDSLVQSMNVTDGVKARFFINILALANSAGEK
VLAFGSYILPMKFLERLLVKTRGWHVGKEIFVISGDTSQEDREVAMDQFNNSADARVLFG
SIRACGEGISLVGASRVVILDVHVNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEEGD
HEKAFKKEVIPKLWFEWSEQHCTSEDFKLNKLEIDDCEDELLDNNAMRQDIKALYRR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcccccagcgaagactccccagcggcgtcctctggcatgtactaccggaga
aaaaagaaggctcctgaccccgtcggtgctctttcacttccggctgcaagtatgggtcgc
atatggggatgcggcagtgttagcaaggaggtggaaagttcgtatgctcggaggctccaa
ttgctaagtttcctttccactactctgcctgaccccaccgggagtcacgtggcgggtgct
gcaactaattcgaccgagagccccgtcagccaagaacaggggaatagcaaagtggtaata
aatcttgattcagatgatgaagatgaaagcattgcagcgtgcaagcaaccggcacctgag
aagagcaatcagctcacgcctgaggaaaacaagctgctgatgccatcagagcatgctggt
actctcacgacatggctggcaaccgaagcaaatgatgaaccaagtgagaccaagcgtgat
ggtgatggaggccaaaccagtcaaattgttccgtattgtcagagtgcagctatagtgaat
cagtatcctttgcccagttatcaaccgtcagtgcagtttgagagagttatattgcagaga
agacctgaggaggaacgtatccaagatctggctgttgctacccgtgtggagaagatagca
gaaacacaagttttccctgctcttcctaaggagagaaaacaaaagaaaattgacccaagc
tcccagctagatggggatgctgaaactacgccaagaaaaagaaaaggaaaaaacaatgcg
aatccagcggtattgggttttccctcggaaacttgcaatcctgtggaggaagatgagcct
atggaggaagatgagcctatggaggaagaggataaatcagaaaaagaaagtgatggtctc
gaggatttttggaatgacttctcattggctgtagaaagctctaagcttgacactgttgaa
gaagtagccaatgagaaagaagtgggtgaaaaagaggtggacactgactgcaatcatgac
atacagattcatgatgatctgggtcatgtatgccgcgtctgcggtatgattgtgagaagg
gctgacacgatcattgattatcagtggaaaaaggcatcaaggtcaagatcttatttctct
gaaacacgttcaaaggatcctgacgagattgtcattggtgatgttagagtcgctgaagaa
cttcttgtgttagacattgccattcatccaagacatgcaaagcaaatgagaccacatcag
ttggcaggtttccactttctggttaagaatttagtctctgacaaaccaggaggttgcatt
ctagctcatgcccctggttcggggaagacattcatgctcattagcttcattcagagcttc
ctggcaaagtacccttctgcaaggcctcttgttatacttcctaaaggtatattaggtaca
tggaagagggaatttcaacagtggcaagtggaggacataccactgtatgatttctattct
gtcaaggctgacaagagaacagatcaattggaaatcctcaaagcttggcaagccaaactg
agtatcttgcttgtcggatacaagcagttctcccggatcatttgcagtgatgggggtggc
accgtcgcagctgcatgccgtgacatgttgcttcaggtccctaacctactgataatggat
gagggccacacacctaggaatcgggagactgatgtgctcgaatcactgagcagagtacta
actccacgtaaggtggtcctatctggtacactgttccaaaatcatgtctcggaagtgttc
aacatcttgaaccttgtacgcccgaagtttctcaagactgaatcatctcgtcctatcgtt
aaacgtataatgagtcaagtagccatatcaggtggcaggatttcaaaaccaggtgctgat
aatgccttcactgactcagtagaacacaccctgatggtgcatgatgagaacttcacgaga
aaagcacatgtcattagaagtctcagagaactaaccaaagacgtgcttcactactacaag
ggtgatatcttagatgatctacctggcctagtagacttcagtgtcttcctgaaactcgct
cccaagcagaaagaactcgttcataagttgggagcctatgagatatttaaaaaaggcgca
gtaggaactgcactatacatgcatccttgtctgtcagaaatgtcagaagctgctgctgca
gaaagggctgtcaacgatgcaactattgatagtttggtccagtccatgaatgtgacagac
ggtgtgaaggccagatttttcatcaatatcctggcacttgcaaattctgcaggagagaag
gtgcttgctttcggttcatacatacttcccatgaaattcttggaaaggctactggtcaag
acaaggggctggcatgtaggaaaggagatctttgtgatctccggtgatactagtcaagaa
gatagagaagtggcaatggatcagttcaacaactccgccgacgcaagagttctgtttggt
tccatcagggcatgcggggagggcatctccctcgtgggtgcatcgagagttgtcatccta
gatgtccacgtgaacccgtccgttacccgtcaagcgattgggcgggctttcaggcctggg
cagcagaagaaagtgtttgtgtacaggctcgtagccgccgattctccggaggaaggcgac
catgagaaggcgttcaaaaaagaagtcataccgaagctgtggttcgaatggagcgagcag
cactgcacgtcagaggacttcaaactgaacaaacttgagattgatgactgcgaagacgag
ctgctggacaacaatgcgatgcgccaggacatcaaggctctgtatagaaggtga
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