Leminorella richardii: NCTC12151_00577
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Entry
NCTC12151_00577 CDS
T05503
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lri
Leminorella richardii
Pathway
lri03410
Base excision repair
lri03430
Mismatch repair
lri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12151_00577 (recJ)
03430 Mismatch repair
NCTC12151_00577 (recJ)
03440 Homologous recombination
NCTC12151_00577 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_00577 (recJ)
Enzymes [BR:
lri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.-
3.1.-.-
NCTC12151_00577 (recJ)
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC12151_00577 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12151_00577 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12151_00577 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
SQI35994
UniProt:
A0A2X4XH83
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All DBs
Position
1:593913..595646
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AA seq
577 aa
AA seq
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MTIKTELRRRPQIDGSFLPPTISPLLRRLYASRGVTTAEQLEKGAKGLLGYQSLVGIEPG
VELLVQALHERKRIVIVGDFDADGATSTALSVLALRSMGFPSVKYLVPNRFEDGYGLSPE
VVEQAAELGVDLIVTVDNGISSHAGVDCAHDKGIQVLVTDHHLPGDSLPAAEAIINPNLN
DCEFPSKSLAGVGVAFYLMLALRARLRKDDWFANQNIAEPNLAELLDLVALGTVADVVAL
DANNRILVHQGLNRIRAGQCRAGIRALLEVSERDARKLTANDLGFSLGPRLNAAGRLDNM
SIGVELLLCDSMTEARAMASDLDALNQTRREIEQGMQVEALKLCDELEQGADALPYGLAM
YHPEWHQGVVGILASRIKERFYRPVIAFAPAGNGVLKGSGRSIAGLHLRDALERLDTLYP
GLMLRFGGHAMAAGLSIEETRFDEFRQRFAELIGDWLDPSALEGVVWTDGELESPLLTLQ
TAEELRDAGPWGQAFPEPTFDGSFKILQQRLLKDRHLKITVEPVGGGALLDGIAFNVDTT
QWPDPSVKEATIAYKLDVNEFRGNRSVQLMIQHLWAK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaaaactgagcttcgccgccgccctcaaatagacggcagctttttgccgcca
acgatttcaccactgctgcgccgcctttatgcctctcgaggcgtaacaaccgctgaacag
ctggaaaaaggggcaaaagggcttttgggctaccaaagccttgtcggcattgagccgggc
gtagagctattggttcaggcgctgcacgagcgaaagcgaatagtcattgttggcgacttt
gacgccgatggggcaaccagcactgcgctgagcgtgctggcgctgcgcagcatggggttt
ccctccgtaaaatacctagtgccaaatcgctttgaggacggttacggcctgagccctgaa
gtggtggagcaggcagctgaactgggtgtagatcttatcgtgactgtggacaacggcatt
tcctctcacgcgggggtggactgtgctcacgacaaaggcattcaggtgctggttaccgat
caccacctgccaggggactcgctgcctgccgctgaggcgattattaaccctaacctgaac
gactgtgaatttccttccaagtctctggcgggagtcggcgttgcgttctatctgatgttg
gcgctgcgcgccagactgagaaaggacgactggtttgcgaaccagaatattgctgaaccc
aatctggctgagctgctcgatctggttgcccttggcaccgtcgctgacgtcgtggcgctg
gacgccaacaaccgcattttggtgcatcaggggctaaaccgcattcgtgccgggcagtgc
cgagctgggatccgggcgctgttggaagtgtcggagagggacgctcgaaagctgaccgct
aacgatctggggttctcgctggggccgcgccttaacgccgctgggcgcttggacaacatg
tctatcggcgtggagcttctgctgtgcgacagcatgacagaggcgagggccatggccagc
gatctcgatgcgctaaaccagactcgccgtgaaatagagcaggggatgcaggtcgaagcg
ctaaagctatgtgatgagctggaacagggagccgacgcgctgccctatgggctagcgatg
tatcaccctgagtggcatcagggtgtggtagggattttggcgtcccgcatcaaagagcgc
ttttatcgcccggtgattgcttttgctcccgccggtaacggagtgctgaagggctctggt
cgctcgattgcagggctgcacctgcgcgacgcgctggaacggctggatacgctgtatccc
ggcctgatgctgcgctttggcggccacgcgatggccgcgggtctgtctatcgaagagacc
cgtttcgacgagtttcgccagcgttttgccgagctgattggcgattggctagacccttct
gcgctggaaggcgtagtctggacggacggcgagctggaaagcccgcttttgacgctacaa
accgccgaagagctgcgcgatgcagggccttgggggcaggctttccctgagccgacgttt
gacggctcgttcaaaattttacagcagcggttgctgaaagatcgtcatctgaagatcacg
gtggaaccggttggcggcggcgcgttgctggacgggatcgcctttaacgtagatacgaca
cagtggccggatcccagcgtaaaagaggcgacaatcgcctataagctcgatgttaacgag
tttcgcggcaaccgcagcgtacagctgatgattcaacacctgtgggcgaagtag
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