KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133340801
Entry
133340801         CDS       T09663                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133340801 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrj03019]
    133340801 (CSTF1)
Messenger RNA biogenesis [BR:lrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     133340801 (CSTF1)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_Gbeta CSTF1_dimer Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_NWD2_C Cytochrom_D1
Other DBs
NCBI-GeneID: 133340801
NCBI-ProteinID: XP_061405191
LinkDB
Position
10:1813463..1821886
AA seq 433 aa
MSTRGYKATVRDREELYRLIISQLLYDGHAAIAATLIGAVNLGPAVPPSERLLHLARIGK
EQEDTNPSRPVGRSDMVAPGTGVDLEFDADVQTCSPEACEYETCYVTSHKGPCRSATYSR
DGQLIATGSADASIKILDTERMLAKSATPIEVMMNETAQQNMENHPVIRTLYDHTDEVTC
LAFHPTEQILASGSRDYSLKLFDFSKPSVKRAYKSLQEAEVLRCLAFHPAGDFLLVGTRH
PTLRMYDVTTCECYVSPNPADQHTDAVTGVAYNPTANSYVSCSRDGTIKLWDGVSSRCVA
TYDRAHGGAPVCSVVFSRNAKYVLSSGKDSMVRLWELSAGRALLTYTGAGLSGKQTHRTQ
AVFNHTEDYVLFPDEWTVSLCCWDSRTTERKNLLSLGHNNAVRCLVHSPTSAGFMTCSDD
YRARFWYRRAATE
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgtcgacgcgaggctacaaggcgacggtgcgggaccgcgaggagctctaccgcctcatc
atcagccagctgctgtacgacggccacgccgccatcgccgccaccctcatcggcgccgtg
aacctgggccccgccgtgccgccctccgagaggctgctccacctcgcccggatcgggaag
gagcaagaggacaccaacccgagccggccggtggggcgttcggacatggtggcgccgggg
acgggggtggacctggagttcgacgcggatgtgcagacgtgctcgccggaggcgtgcgag
tacgagacgtgctacgtgacgtcgcacaaggggccctgccgctccgccacctacagccgc
gatgggcagctcatcgccacgggctcggccgacgcctccatcaagatcctcgacaccgag
cgaatgctggccaagagtgcgacgcccatcgaggtgatgatgaacgagacagcccagcag
aacatggagaaccacccggtgatccgcacgctttacgaccacacggatgaggtgacctgc
ctcgccttccaccccaccgagcagatcctggcctctggctcacgcgattactcgctcaag
ctcttcgacttctccaagccgtccgtcaaacgggcgtacaagtcgctgcaggaggcggag
gtgcttcgttgcctggccttccacccagcgggcgacttcctcctggtgggcacacggcac
ccgacgctgcggatgtacgacgtgacgacgtgcgagtgctacgtgtcgcccaaccccgcg
gaccagcacacggacgccgtcacgggcgtcgcctacaacccgacggccaactcctacgtg
tcctgcagccgcgacggcaccatcaagctgtgggacggcgtgtcaagccgctgcgtggcc
acgtacgaccgcgcgcacggcggggcgcccgtctgctccgtggtcttctcgcgcaatgcc
aagtacgtgctctcaagtggcaaggactcgatggtgcgcctctgggagctgtcggcaggg
cgcgcactgctcacctacactggcgctggcctcagcgggaagcagactcaccgcacacag
gccgtgttcaaccacacggaggattacgtgctcttccccgacgagtggacagtcagcctc
tgctgctgggattcccgcaccacggagcgcaagaacctcctctcgctgggccacaacaat
gccgtccgctgcctcgtccactcgcccaccagcgctggcttcatgacctgcagcgacgat
taccgcgctcgcttctggtaccgccgcgctgctaccgagtga

DBGET integrated database retrieval system