Lethenteron reissneri (Far Eastern brook lamprey): 133342742
Help
Entry
133342742 CDS
T09663
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133342742
Enzymes [BR:
lrj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
133342742
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
133342742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
133342742
NCBI-ProteinID:
XP_061408084
LinkDB
All DBs
Position
15:complement(13481212..13490568)
Genome browser
AA seq
456 aa
AA seq
DB search
MAMPAPFRAPKRKRWPREPYEGPFPVPIRRRAPLLLDGPTPVPLENEPSNTDVGAADPST
TRGIGVAHQQPGSVAPAAGPSAAVENESDSMCGNLGLPVAAVTFGEGREGSDESERYRGE
LVHSAVLVRDRGDMEALYSRGFFGKGFLSKSRPQFSETRRFTPPGSQPCRDPRRDREQPG
TLPGTRSVETVSLLCGAATSNGNNDAVGDGACPRQRDGSAVGHDDGDNAAGREVDRDSDG
AARLDSAHAAHTDSGATTATEEVPDESCKPIVGCQQKTERIAEHLQLALEEAFFLAYALG
CLTVSLNEEELSLSELWRVCVRACPRFLALYPAYHYFRSRGWVPKPGLKYGTDLLLYRKG
PPFYHASYSVVVEMVDGANFRGDALRTFSWRSLAGLNRTTMNVSKELLLCFVVRPAGLTE
EELSSPECLRRLRVQEVVVGRWVSGRERGNRDDLDL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcccgctccgttccgtgcccccaagcgcaagcgctggcctcgcgaaccgtac
gaggggccttttccggtgcccatacgtcgtcgcgcccctcttctgctggatgggccaacg
cccgtccctctcgagaacgaaccctcgaacacagacgtgggcgccgctgacccgtccacc
acgaggggtattggagtggcgcaccagcagcctggcagcgtcgctcccgccgcagggccg
agcgccgctgttgagaacgaaagcgattccatgtgtgggaacctcggtctacctgttgcc
gctgtgactttcggcgaggggagagaagggagcgatgagtcagagcgctacagaggagag
ctggtgcacagtgcggtgctggtgcgagaccgcggggacatggaggcgctgtacagccga
ggattttttggaaaagggtttttgtcgaaaagcagacctcagttttctgagacccgacgt
ttcacgcctccgggaagccagccttgccgggaccctcggagggatcgtgagcaacccggc
acattgcccggcacgcgcagcgtggagacagtctcactgctttgcggcgctgctacgagc
aacggcaacaatgacgctgtaggggacggcgcttgcccccgccagcgcgatggttcggcc
gtcggccatgatgatggagataacgcagcaggacgagaggtggacagggacagtgatggt
gccgcacggctggattcagcgcatgccgctcatacggattcaggagcgacaacggcgacc
gaagaggtaccggatgaatcgtgcaagcccatcgtcgggtgtcagcaaaagacggagcgc
attgcagagcatctgcagctagccctggaggaggcattttttttggcgtacgccctgggg
tgcctgaccgtctccctaaacgaggaggagctgtccctgagtgagctgtggagagtgtgc
gtgcgcgcgtgcccacgcttcctagccctctacccggcctaccactacttccgctcccga
ggctgggtccccaaacccggcctcaagtacggaaccgacttgttgctctaccgaaaagga
ccacccttttaccacgctagctactcggtggtggtggagatggtggacggtgccaatttc
cgcggtgacgccctccgaaccttcagctggcgctcgctcgcgggcctcaaccggacgacc
atgaacgtgtccaaggagctgctgctgtgtttcgtggtgcgtcccgcgggcctgacggag
gaggagctctcttctcccgagtgtctgcgccgcttgcgcgtgcaggaggtggtggtgggg
cggtgggtatctggacgggagcgcggcaaccgtgacgacctggatctgtga
DBGET
integrated database retrieval system
