Lethenteron reissneri (Far Eastern brook lamprey): 133345963
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Entry
133345963 CDS
T09663
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133345963
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133345963
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
133345963
NCBI-ProteinID:
XP_061413105
LinkDB
All DBs
Position
23:10854617..10949440
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AA seq
2007 aa
AA seq
DB search
MAAPVLLPPGPHSLRRFTPESLAAIEQRAAHEQAKKAKGFESEDDQPKPSSDLEVGKSLP
FMYGDMPSECVAEPLEDLDPFYSTQKTFIVLNSGKAIFRFSATPALYILTPFNPVRRYAI
KILTHSLFSIFIMFTILTNCVFMTMSEPPTWTKNVEYTFTGIYTFESMVKILARGFCLHP
FTFLRDPWNWLDFCVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
AVKQLSDVMILTVFCLSVFALIGLQLFMGNLRHKCILWPIANQTNVTEFNETVEPFNWEN
YVNNEDNQYKLEGSKDALLCGNGSDAGSCPEKFVCIKGGRNPNYGYTSFDTFSWAFLSLF
RLMTQDYWENLYQLTLRAAGKPYMIFFMVVIFLGSFYLINLILAVVAMAYEEQNQATMQE
ADKKDREFQAMMEQLKRQQEDLGNGGGTGDSEPLSRSSSETSRLSSKSANESRNHRKKQR
QKSDSDEGEEKRDDEKIPKSVSEESMLRKPGSLHGSRKYSTHRESLISMYYKPKRKSSRT
SLLSFREKVREHNSDNDFADDEQSELQSMAGEAGSRRNSLFVPQRGHGERRNSQGSKLSW
AGPNPPILPPLNGKMNVSVDCNGVVSLVDRPAGTSVPNSPPGLLLPEVVIDKAVTDDNVT
TETELLKKRRRGSQHTSMDLLEEPVIIRNRAYSAISVLTNTMEELEESRQNCPPCWYKFA
NKYLIWECCSLWMKVKEILKMIVTDPFVDLSITICIILNTLFMALEHYPMTPEFENALSV
GNLVFTGIFTAEMVLKIAAQDPYYYFQQGWNIFDSIIVSLSLMELGLSSVDGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQLFGKMYKECVCK
ISENCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLV
VLNLFLALLLSSFSGDNLSATDDDGEMNNLQVAIGRIERGVSFVKRSICDVFRKALKRSC
DNEEMKALDDLGGLDKMEIYVGNHTGVQGDSIVKDGNGVASGAASVGNSLKNHHVLDVDR
LGFLTNPNLGVRVPIAVGESDFENRDEEDEDDDNQTTESGMDGSKEKLDTVSSSEGSTVD
IQKEGEVEIPVELVEEMMEPEECFTEGCLHRFPYCRLDLGTERGRSWWNLRRACYRIVEH
NWFESVIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYVFILEMLLKWVAYGFQ
KYFTNAWCWLDFLIVDVSLVSLVANAMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVV
NALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKYYYCLNKTDGQRLPISIVDNYSMCI
ALNDTTNETLWKNVKVNFDNVGIGYLSLLQVATFKGWMDIMYAAVDSRDVKDQPSYEINL
YMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGEDIFMTEEQKKFHNAMKKLGSK
KPQKPIPRPGNKLQGMVFDFVTKQVFDILIMILICLNMVTMMVETDNQSIEMENILFSVN
LVFIVVFTGECVLKMLALRQYYFTIGWNIFDFVVVILSIVGIMLADMIQKYFVSPTLFRV
IRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKK
ESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGVPDCDPEIEHPGSLVKGDCG
NPMVGIVFFVSYIIISFLVVVNMYIAIILENFSVATEESSEPLSEDDFEMFYEIWEKFDP
DATQFIAWERLPDFADALEEPLRVPKPNKIKLIAMDLPMVINDRIHCLDILFAFTKRVLG
EGAGMDALKTQMEDRFMAANPSKTSYEPITTTLRRKQEEVAVRVIQRAYRRHILHRSLKQ
ASYIYRHRKSDGNILEEEAPEKDGLIARNMRANFSTDCENGDSSTITPPPSFESLEIMDN
TNKHGGYNDEDPKERDIEGKDIRESIV
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccagtgctgttaccgcctggaccgcacagtctgcgacgcttcacacccgag
tccctggccgccatcgagcagcgtgcggcccacgagcaggcaaagaaagccaagggcttc
gagagcgaggacgaccagcccaagcccagcagcgacctggaggtcggcaagtcgctgccg
ttcatgtacggcgacatgccgtccgagtgcgtggccgagccgctggaagacctggatccc
ttctacagcacgcagaagacatttatagtcctgaattcagggaaggccatcttccgattc
agcgccacacctgcattgtatattttaactccattcaaccccgtcagaagatacgctatc
aagattttaacacattcgcttttcagtatattcataatgttcaccattctaaccaactgt
gtcttcatgaccatgagcgagccgcccacttggaccaagaatgtggaatacacgttcaca
ggaatctataccttcgaatccatggtgaaaatcctggctcgtgggttttgccttcaccct
tttacattcctgcgtgacccttggaactggctcgacttctgcgtcatcgtcatggcatac
gtcacggaatttgtcgacttgggcaatgtctcggccttgagaacgttcagggttctccga
gccctcaaaaccatctccgttattccaggtctaaagacgatcgtaggtgccctcatccag
gcagtgaagcagctgtcggacgtgatgatcctcaccgtgttctgcctgagcgtgttcgcg
ctcatcggcctgcagctcttcatggggaacctgcggcataagtgcatcctctggccgatt
gccaaccagaccaacgtcacggagttcaacgagaccgttgagcccttcaactgggagaac
tacgtcaacaacgaagataatcagtacaaactggaagggagtaaggatgctctcctgtgt
ggaaatggatccgatgctggttcctgcccagagaagttcgtctgcatcaagggaggccgc
aaccccaactacggctacacgagcttcgacaccttcagctgggccttcctgtcgctgttc
cgcctcatgacgcaagactactgggagaacctctaccagctgactctgagggcagctggc
aagccgtacatgatcttcttcatggtggtcatcttcctgggctccttttacctcatcaac
ctcatcctggccgtggtagccatggcctacgaggagcagaaccaggccaccatgcaggag
gccgacaagaaggaccgtgagttccaggccatgatggagcagctcaagaggcagcaggag
gatctggggaatggggggggcacaggggacagcgagcccctgtcccggagctcatccgag
acgtcgcgcctgagctccaagagcgccaatgagagcaggaatcatagaaagaagcagagg
cagaagagcgactcggacgagggggaggaaaagagagacgacgagaagatccccaagtcg
gtgtcggaggaaagcatgctccgcaagccgggcagtctacacggcagccgcaagtactcg
acgcaccgagagtccctgatcagcatgtactacaagccgaagaggaagagcagccgcacg
agcctgctcagcttccgggagaaggtgcgcgagcacaactccgacaacgactttgccgac
gacgagcagtcggagctgcagagcatggccggggaggccggcagccgtcgcaactcgctg
ttcgtgccgcagagaggccacggcgagaggcgcaacagccagggcagcaagctatcttgg
gccgggccgaacccgcccatcctgccgccgctcaacggcaagatgaacgtgtcggtggac
tgcaacggggtggtgtcactcgtcgaccggccagccggaacttcggttcccaactcgccc
ccggggctgctgctgcccgaggtggtcatcgacaaggccgtcacggatgacaatgtcaca
actgaaacggagctgctaaagaagcggaggcgtgggtcccagcacacctccatggacctc
ctggaggagccggtgataataaggaacagggcatacagcgccatcagcgtgctcaccaac
accatggaagagctggaggagtcgaggcaaaattgccccccgtgctggtacaagtttgcc
aacaaatacctcatctgggagtgctgctcactctggatgaaggtgaaggagatcctcaag
atgatcgtcacggaccccttcgtggacttgtccatcaccatatgcatcatcctcaacacc
ctcttcatggccttggagcactaccccatgaccccggagtttgagaatgccctgtccgtg
ggaaatctggtgttcacgggcatattcacggcggagatggtgctgaagattgcggctcaa
gatccctactactacttccagcagggctggaacatcttcgacagcatcatcgtcagcctc
tcgctcatggagctgggcctgtcttccgtggacggtctatctgtgctgcgctccttccgc
ctcctccgcgtgttcaagctggccaagtcgtggcccacgctcaacatgctcatcaagatc
atcggcaactcggtgggcgccctcggcaacctaacgctggtgctggccatcgtcgtcttc
atctttgccgtggtggggatgcagctctttggcaagatgtacaaggagtgcgtgtgcaag
atcagcgagaattgcaccctgcctcgctggcacatgcacgacttcttccactcgttcctc
atcgtgttccgcgtgctctgcggcgagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcatcgtcttcatgatggtcatggtcatcggcaaccttgtg
gtgctcaacctcttcctggcgctgctgctgagctccttcagcggcgacaacttgtcagcc
acggacgacgacggggagatgaacaacctgcaggtggccatcggccgcatcgagcgtggc
gtctccttcgtcaagcgttccatctgcgacgtcttccgcaaggcgctcaaacgcagctgt
gacaacgaggagatgaaggccttggatgacctcggaggcctcgacaagatggagatctat
gtggggaaccacacgggcgtgcagggagattcaatcgtgaaggacgggaacggcgtggcg
agcggcgccgccagcgtggggaacagcttgaagaaccaccacgtgctggacgtcgaccgt
ctcggcttcctcaccaaccccaacctgggcgtgcgcgttcccatcgccgtgggcgagtcc
gacttcgagaaccgtgacgaggaggacgaggacgacgacaaccagaccacggagtccggc
atggatggaagcaaggagaagctggacacggtgagctcgtccgagggcagcacggtggac
atccagaaggagggagaggtggagatccccgtggagctcgtggaggagatgatggagcca
gaggagtgcttcacagaaggctgcctgcaccgcttcccgtactgccgcctggacctgggc
acggaacgtgggaggtcctggtggaacctgcgccgtgcctgctatcgcatcgtggagcac
aactggttcgagtcggtcatcgtgttcatgatcctgctcagcagcggtgccctggccttt
gaggacatttacatcgagcagaggaagacgatcaagacagtgctggagtacgctgacaag
gtcttcacctacgtcttcatcctggagatgctgctcaagtgggtggcctatggcttccag
aagtacttcaccaacgcgtggtgctggcttgactttctcatcgttgatgtctctttagtc
agtctcgtagctaatgccatgggctactcggaactgggcgccattaagtcccttaggacg
ctaagagcactgaggcccttgagggccctatcacgatttgaagggatgagggtggtggtg
aacgcgctcgtgggcgccatcccctccatcatgaacgtgctgctcgtgtgcctcatcttt
tggctcatcttcagcatcatgggcgtcaacctgttctcggggaagtactactactgcctc
aacaagacggacggccagcgcttgcccatctccatcgttgacaactacagcatgtgcatc
gcgctcaatgacaccaccaacgagactctgtggaagaacgttaaggtcaatttcgacaac
gttggcatcggttatctctccctgctgcaagtcgccacatttaagggctggatggatatc
atgtatgcagcagtggattcacgtgatgtaaaggatcagccgtcctacgagatcaacctt
tacatgtacctctacttcgtcatctttattatcttcggctcatttttcactctcaatctc
ttcatcggtgtcatcatcgacaacttcaaccagcaaaagaaaaagtttggaggggaggac
atcttcatgacagaagagcagaagaagttccacaatgccatgaagaagctaggctcgaaa
aaaccacagaagcccattccgagacctgggaacaaactccagggaatggtcttcgacttt
gtgacgaagcaagtatttgacatcctcatcatgatcctcatctgcctgaacatggtgacc
atgatggtggaaaccgacaaccagagcatcgagatggagaatatcctcttcagtgtcaac
ctcgtcttcatcgtcgtcttcacaggggagtgcgtgctcaagatgctcgctcttcggcag
tactacttcactatcggatggaacatcttcgactttgtggttgtcatcctctccatagtc
ggcatcatgctggcagacatgatccagaaatattttgtgtcgccaacacttttccgagtt
atccgcttagcccggattggacgaatcctacgtctcatccgaggtgccaagggaatccgt
acgctgctctttgccctcatgatgtccctccccgccctcttcaacattggcctcttgcta
tttctcgtcatgttcatctactctatcttcggcatgtccaacttcgcctatgtgaaaaag
gagtccggcattgacgacatgtttaactttgagacatttggcaacagcatgatctgccta
tttcaaatcaccacttcagctggctgggatggtctcctcgccccgatcctgaacagcggt
gtcccggactgtgaccctgaaattgagcacccaggcagcctggttaagggcgactgtggg
aaccccatggtcgggattgtatttttcgtcagctacatcatcatctctttcctggttgtg
gtcaacatgtacatcgccatcatcctcgagaacttcagcgttgccacggaggagagttca
gagccattgagcgaagacgacttcgagatgttctatgaaatctgggagaagttcgaccct
gatgccacccagttcatcgcctgggagaggttgccagactttgccgatgccttagaggag
ccgctcagagttcccaaaccaaacaagatcaagctgattgcgatggatctgcccatggtg
attaacgacaggatccactgcctggacatcttgttcgcgttcacgaaacgtgtgctgggt
gagggcgccggcatggatgcgctcaagacccagatggaggaccgcttcatggcggccaac
ccctccaagacttcgtacgagcccatcaccaccacactgcggcgcaagcaggaggaggtg
gctgtgcgcgtgatacagcgcgcgtacaggcgccacatcttgcaccggtccctcaagcag
gcctcctacatctaccggcaccggaagagcgacggaaacatcctggaggaggaagcgccc
gagaaggacgggctcatcgcaaggaacatgcgcgccaacttctccaccgactgcgagaac
ggtgactcctccaccattactcccccgccttcatttgaaagcttggaaataatggataac
acaaacaagcacggtggatacaacgatgaggaccccaaggagagggacatcgaagggaag
gacattcgtgaatcgatagtatag
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