Lethenteron reissneri (Far Eastern brook lamprey): 133347268
Help
Entry
133347268 CDS
T09663
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04141
Protein processing in endoplasmic reticulum
lrj04210
Apoptosis
lrj04217
Necroptosis
lrj04218
Cellular senescence
lrj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133347268
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133347268
04217 Necroptosis
133347268
04218 Cellular senescence
133347268
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133347268
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrj01002
]
133347268
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
133347268
Peptidases and inhibitors [BR:
lrj01002
]
Cysteine peptidases
Family C2: calpain family
133347268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
133347268
NCBI-ProteinID:
XP_061415378
LinkDB
All DBs
Position
25:complement(13418948..13462739)
Genome browser
AA seq
706 aa
AA seq
DB search
MPQLGITARLQRELLKADGVGATCDRASQHMGQDFERIRQRCLESGALFEDDRFPAAAPT
LGFKELGPGSSKTRGLQWCRPPDICSNPQFVVGGALRTDICQGALGDCWLLAAIASLTLS
EKLMARVVPVGQTFEDAYAGIFHFQFWQFGEWVDVVIDDRLPVKNGELVFVHSAEGNEFW
SALLEKAYAKLHGSYEALSGGSTTEGFEDFTGGVAESIELSKPPSNLWRMLQQATLRGSL
MGCSINITNQADSEAITSRKLVKGHAYSLTGTTEVDYQGQMVRLVRIRNPWGQVEWTGAW
SDNAPQWGYVSDEDRGRLQVSQEDGEFWMSFDDFLRQFSRLEICNLTPDALEDDSLGHWS
ATNFEGSWVRGCSAGGCRNFIDTFWTNPQFRVRLDEEDDDPHDNEAGCTFIVALMQKERR
KKRRQGGDVLTVGYAIYEVPEQFVGQPQVKLKKDYFQYHSSKARSEVFINLREVSQRFTL
PAGEYIVVPSTFEPNQEADFILRVFSEKQSVTVPMDNEVDITIPATMPDDEPIDPGFYKL
FDRLAGEDQEISAKELQSILNRVVSKHANLKTDGFGLEACRSMVSLMDKDGTAKLGVKEF
NFLWKKIKNWQQIYLEYDTDSTGTMNSMEMRLALEAAGFRLNEKLNQIVTTRYADGENGI
TIDFDNYVCCLVRLETMFRTFQALEKDGNEKINLNLPQFLHVTMFA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaactcggcatcacggcgcgtctccaacgcgagctgctgaaggctgacggcgtg
ggggccacctgcgacagggcgagccagcacatgggccaggacttcgagcgaattcgacag
cgatgcctcgagagtggagccctcttcgaagacgaccgcttccccgccgctgcgcccacg
ctgggcttcaaggagctggggccaggctcgtccaagaccagagggctgcagtggtgcaga
ccgccggatatctgcagcaacccgcagtttgtggttggcggtgcattacgcacagatatc
tgccagggagctctgggcgattgctggctgctcgctgccatcgcctcgctcacgctcagc
gagaagctcatggcgcgcgtggtccccgtgggccaaaccttcgaggatgcctacgccggc
atcttccacttccagttctggcagttcggggaatgggtggacgtggtcatcgacgaccgc
ctgcccgtgaagaatggcgagctcgtgttcgtccactcggccgagggcaacgagttctgg
agcgccctgcttgagaaggcctacgccaagctgcacggctcctacgaggccctgtctggg
ggcagcaccacggaggggtttgaggacttcacggggggtgtggcggagagcatcgagctc
agcaagcccccgagcaacctctggaggatgctgcagcaggcgacgctgcgcggctcgctc
atgggctgctccatcaacatcacgaaccaggcggactcggaggcgatcacctcccgcaag
ctcgtcaaggggcatgcgtactccctgaccggcacgacggaggtcgactaccagggccag
atggtgcggctggtgcgaatccgcaacccctggggccaggtggagtggaccggagcctgg
agcgataacgcgccccagtggggttacgtgagcgacgaggacaggggccgcctgcaggtc
agccaggaggacggagagttctggatgtccttcgatgacttcctgcgccagttctcgcgt
ctggagatctgtaacctgaccccggacgcgctggaagacgactcactgggccactggagc
gccaccaacttcgagggcagctgggtgcgtgggtgcagcgccggtggctgccgcaacttc
atcgacaccttctggacgaacccgcagttccgcgtgcgcttggacgaggaggacgacgac
ccccacgataacgaggctggctgcacgttcatcgtggcgctcatgcagaaggagcggcgc
aagaaacggcgccagggcggcgacgtactcaccgtgggctacgccatctacgaggtccca
gagcagttcgtgggccagccgcaggtgaagctgaagaaggattacttccagtaccactcg
tccaaggctcgctccgaggtgttcatcaacctgcgcgaggtgtcgcagcgcttcacccta
ccggcgggcgagtacatcgtcgtgccctccaccttcgagcccaaccaggaggccgacttc
attctgcgcgtcttctcagagaagcagagcgtcaccgtgccgatggacaatgaagtggac
attacaatccccgcaaccatgcccgatgatgagcccattgacccaggcttctacaagctg
ttcgaccggctggcaggggaggaccaggagatcagcgccaaggagctgcagagcatcctc
aaccgcgtcgtgtccaagcatgccaacctgaagacggatggctttgggctggaagcgtgc
cgcagcatggtctcgctcatggacaaagacggcactgccaagcttggcgtgaaggagttc
aactttctgtggaagaagatcaagaattggcagcaaatctacctcgagtacgacacggac
agtacgggaaccatgaactccatggagatgcgattggcgctcgaagcagcgggattccgc
ctgaacgagaagctgaaccagatcgtcacgacccgctatgcggacggcgagaacggcatc
accatcgattttgacaactacgtgtgctgcctcgtccgcctggagaccatgttccgtaca
ttccaagccttggagaaggatggtaacgagaagatcaatctgaacctcccgcagttcctc
cacgtgaccatgttcgcttga
DBGET
integrated database retrieval system
