Lethenteron reissneri (Far Eastern brook lamprey): 133350881
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Entry
133350881 CDS
T09663
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133350881 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133350881 (SS18)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133350881 (SS18)
GBAF(ncBAF) complex
133350881 (SS18)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SSXT
FlaX
FlaG
Aquarius_N_2nd
Motif
Other DBs
NCBI-GeneID:
133350881
NCBI-ProteinID:
XP_061421689
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Position
35:7842447..7884767
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AA seq
373 aa
AA seq
DB search
MSLAFVASRQQQQQQQQQQQQQQQQQQRSKSEVSQASIQKMLDENNHLIQCILDYQSKGK
TSECSQYQQMLHRNLVYLATLADSSQNSQSLLPTLPNQSLGMGAGGGLPPGGAPHSQSLP
PDPAPPPPHMQGPMSNGHMAGPNSMAMQPPNHQASPALSLPASSHATMAGYSHSVPSSGP
GGPSQAYRTPPASQGQGHMVSQQPAPSQYNLAQGSGQHYQGMMGGGAGQGSQMMGQRQMP
GYSRSAQQGPPQQFGSQDDYYAEQYSHGQPPADGMTPQYYPDGTGQYGQQQGSYQPGPPA
QTYPSQQQFGGPQGYPSQGQGYAGPAQTASGQYAGYPQGQQYGAYRPPQPGPPTPQQQRP
YGYEQGQYGAYQQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcgtttgtcgcatcccggcagcagcagcaacaacaacaacaacagcagcaa
caacaacaacaacagcagcagcgaagcaagagtgaggttagccaggcgagcatccagaag
atgttggatgaaaacaaccacctcatccaatgcatcctggactaccagagcaagggcaag
acatcggagtgctcgcagtaccagcaaatgctgcacaggaacctggtttacttggcaacc
ttggccgactcgagtcagaactcacagtccttactgcccacgctgccaaaccagagtctt
gggatgggggctggtggaggcctccctcccggaggagctccccactcgcagagcctgcct
cctgatcctgcgcccccacccccacacatgcagggcccaatgagcaacggacacatggct
ggaccaaactccatggcaatgcagcctccaaaccaccaggcgagccctgcgctcagcctc
ccggccagcagccatgccaccatggccgggtacagccattcggtgccatcgtctgggcca
ggagggcccagccaggcttacaggaccccgccggccagccagggccaaggccacatggtg
tctcagcaaccggctccatcccaatacaacctggcacagggctcggggcagcactaccag
ggcatgatgggcggtggggccgggcagggcagccagatgatggggcagcgccagatgccc
ggctactcgcggtctgcacagcaagggccgccgcagcagtttggctcgcaggacgactat
tacgcggagcagtactcgcacgggcagccccccgctgacgggatgacgccgcagtactac
cctgatggcacggggcagtacgggcaacagcagggcagctatcagccgggccctcccgcc
cagacttacccgtcccagcagcagttcggtggaccccagggataccccagccagggccag
ggctacgcaggccctgctcagactgcctctgggcagtacgcgggctacccccaggggcag
cagtacggcgcgtaccgccctccacagcccggccctcccaccccacagcagcagcggccg
tacggctatgagcagggccagtacggagcatatcagcagtga
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