Lethenteron reissneri (Far Eastern brook lamprey): 133350972
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Entry
133350972 CDS
T09663
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133350972 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133350972 (EXOSC7)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133350972 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
133350972 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133350972
NCBI-ProteinID:
XP_061421821
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Position
35:complement(13284506..13290448)
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AA seq
292 aa
AA seq
DB search
MAALLLLSEAEKAFIVHGVQDGVRGDGRGCEDFRVVELETEVVSNTSGSARLRLGQTDVL
VGVKAELGSPRPDCPDEGYLEFFVDCSANATPEFEGRGGEELSLEISSALQRSFAHAGCL
DLRSLCILPRQQCWVLYVDVLLLEYGGNVFDAASIAVKAALFNTRIPTVHVSEDEEGVRE
IELSDDPYDCVRLEVARVPCIVTLSKIGERHVVDASLEESCCCRASLLVSVTAAGAITGL
RKAGPGSLHPDSVCHMIETGKRVGVSLHKALDAVLQHEESQGTKREKVGFLG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgctgctgctgagcgaggcggagaaggccttcatcgtgcacggcgtgcag
gacggagtccgcggggacgggagaggatgcgaggacttccgggtggtggagctggagacc
gaggtggtgtccaacacgagcggctccgcgcgcctccgcctgggtcagacggacgtattg
gtgggagtgaaggccgagctgggctcgccgcgtccggactgccctgacgagggatacctg
gagttcttcgtcgactgctccgccaacgccaccccagagtttgagggccggggcggcgag
gagctgagcctggagatctcgagcgcgctgcagcgctccttcgcgcacgccggctgtctc
gacctgcgctcgctctgcatcctcccgcgccagcagtgttgggtgctctacgtggacgtg
ctgctgctggagtacgggggaaacgtgttcgacgccgcctccatcgccgtcaaggccgcg
ctcttcaacaccaggatcccgacggtgcacgtgagcgaggacgaagagggcgtgcgggaa
atcgagctgtccgacgacccctacgactgcgtgcgcctggaggtggcgcgcgtgccgtgc
attgtcacgctcagcaagatcggggagcggcacgtggtggacgcgtcgctggaggagagc
tgctgctgccgcgccagcctcttggtgtccgtgacggcggcgggcgcaatcaccggccta
cgcaaggccgggcccggcagcctgcaccccgacagcgtgtgtcacatgatcgagaccggc
aagcgagtgggcgtgtcgctgcacaaggccctggacgccgtcctgcagcacgaggagtcg
cagggcaccaagagggagaaagtcggcttcctcggatga
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