Lethenteron reissneri (Far Eastern brook lamprey): 133352407
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Entry
133352407 CDS
T09663
Symbol
HPS3
Name
(RefSeq) LOW QUALITY PROTEIN: BLOC-2 complex member HPS3
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133352407 (HPS3)
Membrane trafficking [BR:
lrj04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
133352407 (HPS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
133352407
NCBI-ProteinID:
XP_061424012
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All DBs
Position
40:11143507..11205780
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AA seq
1078 aa
AA seq
DB search
MVRVYGCHPFCGQEVLPVCEEPSLLASGSRTVLALAATRALLLPVQLGPTARALRPFPAA
GDCVTAMAYSETGDYVATIENSKRSPPTVRVYVNWRQTSPQHANRAGTSAAGPRPPNGDD
FAGVTPVGQAAAAATPRYRVRMAGHALSRQKHGAQRSPAHESATHVIEISMQEQPLCLAC
CPTTGNLLVGAAGKRLGLFCRVAHVQRKLPTHGASSETDESGSEHESSDGTDDPNLVDFE
RFAMLTVAFSPLEVALCENYLAFRSEIDIQVLQVDMGAFAGKGLRQDGSPSARPASTPGT
AIGSREVPYRCTQLPEAPFQVEWAGMPTLMHNLGNSLHFSSILYRKFVPSLSPQGAREDL
LHSLQLVPIYVHNWHEARTKAPLGGERQMAALSCFFSQSREGFLYDVLDGARLVSRYQYS
AVSLQAALGTHLLYVVTRENLECYTVHSVTLATRRSDPEVDGERKACPPPSLEVCSLRMQ
HFIGLQRVCVSRDHAILFTRAGLRGTRTPRRPQRPKMRPDGGAGDNNTGWNLYALHLTPL
IQLYNEMVEYGQQYESTCPESRLHLLCEGHLLLRAAALAGGPGWTEASAAEFATAFRESC
ALLGDQYSRLTVDDWRLALPYYRMAGLNAAAVLSRHATSTRAYGRGLLHCLYGMACEREL
LQQETADRVLQVFSTVEPARVPHLVACPGMALVSPALARQALVPPADGDDDAAAAAAKRA
PTSPLCSLAAAFVSLRVDDDDAAEAEAILSGMRQDQVVQAALQEPRLVVRVGTEAPGQGG
ETGATATALGRLLARGHVALMVSTLVSLHESDALSLTDIEDLLVTLGPESEEPCSGVERE
AVPSILLDLWEHLTLVCTKPAVKAQLPEKLARAYLQRIASGDTQSRPALLSAQELRELSK
AHFGKVFPWVALVMKEGGLQMDDQRTQHLEKLQGLLCGGGLASGATDDLLSAAPALGAAE
PIVRALALCHAGSYGLVRRLLMESCPSALVPFASHHFPHSSQVSFWSELLVELCAYVKRI
PEDHHHLGDLVEALKGAMEGASRRLDPLALLELLPDEGQAAFFLPYLLSCCRTHYQGS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcgtgtacggctgccacccgttctgcgggcaggaagtgctgcctgtgtgcgag
gagccgtcgctgctggcgagcggctcgcgcaccgtgctggcgctcgccgccaccagggcc
ctgctgctgcccgtgcagctcggccccaccgcccgtgccctgaggcccttcccggccgcg
ggagactgtgtcaccgccatggcctacagcgagaccggcgactacgtggccacgatcgag
aacagcaagaggagcccgccgacggtgcgagtgtacgtcaactggcgccaaacctcgccg
cagcacgccaacagagccggcacgtccgccgccgggccccggccaccaaacggcgacgac
tttgccggcgtgacgccagtcggccaggcggcggcggcggcgacgccgcggtaccgcgtg
cgcatggccggccacgcgctgtcgcggcagaagcacggggcccagaggtcgcccgcgcac
gagtcggccacccacgtcatcgagatcagcatgcaggagcagccgttgtgcctggcgtgc
tgtccgaccaccggcaacctcctggtgggagcggcaggcaagcgcctcggtctgttctgc
cgcgttgcccatgtccagcgcaagctgccgacgcacggcgccagctcggaaacggacgag
tccggctcggagcacgagtcctccgacggcaccgacgacccgaacctcgtcgactttgaa
cgattcgccatgctcacggtcgcattctcgccgctggaggtggccctgtgcgagaactac
ctggccttccgctcggagatcgacatccaggtcctgcaagtggacatgggggcctttgcc
ggcaagggccttcgccaagacggcagtccctcggcgagacccgcgtctacgcccggcacg
gcaatcggctcgcgcgaggttccctaccgttgcacccagctgcccgaggcccccttccaa
gtggagtgggccggcatgccaaccctcatgcacaacctgggcaactccctgcatttctcc
tccatcctctacaggaagttcgtgcccagcttgtccccccagggagcaagggaagatctc
ctccactctctgcagctcgtccccatctacgtgcataactggcacgaggcgcggacgaag
gcgccgctgggcggcgagcgtcagatggccgccctcagctgcttcttcagccagtcgcgc
gagggcttcctctacgacgtgctggacggcgcgaggctcgtctcgcgctaccagtactcg
gccgtgtccctgcaggccgcgcttgggacccacctcctctacgtcgtcacgcgagagaac
ctggaatgctacactgttcacagtgtgaccctggcaaccagaaggtcggaccccgaagta
gacggagagagaaaggcctgtccgccgcccagcctggaggtgtgctcgctgcgcatgcag
cacttcatcgggctgcagcgcgtgtgcgtgtcacgtgaccacgccatcctgttcacacgc
gccggcctcagaggcaccaggacacccagacggccgcagcggccgaagatgaggccagac
gggggcgcaggggataataacacgggctggaatctctacgccctgcacctcaccccgctg
atacagctctacaatgagatggtggagtacgggcagcagtatgagagcacctgcccggag
tcgcggttgcaccttctgtgcgagggccacctcctgctgcgggcggccgccctcgccgga
ggccccggctggaccgaggcgtctgctgccgagtttgcgaccgcgtttcgcgagagctgc
gcgctgctcggggaccagtacagccgcctcaccgtggacgactggcggctggcgttgccg
tattaccgcatggccggcctcaacgctgccgccgtcctgagccggcatgcgacgtccacg
agggcgtacggcaggggcctcctgcactgcctgtacggcatggcctgcgagcgcgaactc
ctccagcaggagacggccgaccgggtactgcaggtgttcagcacggtggagccggcgcgc
gtgccgcacctggtggcctgccccggcatggcgctcgtctccccggcgctcgcgcgccaa
gccctcgtgccccccgccgacggtgacgacgacgccgccgccgccgcggcgaagagggcc
ccgacgtcgcctctctgcagcctcgcggcggcgttcgtttcgctgcgcgtggacgacgac
gacgccgcagaggcggaggcgatcctgtcggggatgcgccaggaccaggtggtgcaagct
gccctgcaggagccccggctggtggtgcgcgtcggtacggaggcccccgggcagggcggc
gagacgggcgccacggccacggcgctggggcggctgctggcgcgcggccacgtggcgctc
atggtctccacgctcgtgtcgctgcacgagagcgacgcgctgagcctgacggacatcgag
gatctgctcgtgactctggggcccgagagcgaggagccgtgctccggggtggagagggaa
gccgtgccgtccatcctgctcgacctgtgggagcacctgaccctcgtgtgcactaagccc
gccgtgaaggcccagctgccggagaagctggcgcgtgcctacctgcagcgcatcgcgtcc
ggcgacacccagagccggcccgcgctgctctccgcccaggagctgagggagctctcgaag
gctcactttgggaaggtgttcccgtgggtggcgctggtgatgaaggagggagggctgcag
atggacgaccaacgcacccagcacctggagaagctgcaggggctgctgtgcggcggtggc
ctggcctccggcgccaccgacgacctcctgagcgccgcgccggcgttgggagcggccgag
ccgatcgtgcgggcgctggcgctgtgccacgccggcagctacggcctcgtgcgccggctg
ctcatggagagctgcccctccgcactcgtgccgttcgccagccaccacttcccgcacagc
tcgcaggtctccttctggtcggagctcctggttgagctctgcgcctacgtgaaacggatc
ccggaggatcaccatcacctcggcgacctggtcgaggccctcaaaggggccatggaggga
gcgtcgcgccgtctcgatccgctggccttgctggagctgctgcccgacgagggccaagcg
gcgttcttcctgccgtacctcctcagctgctgccgcactcactaccagggcagctaa
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