Lethenteron reissneri (Far Eastern brook lamprey): 133357242
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Entry
133357242 CDS
T09663
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133357242
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133357242
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
SurA_N_2
SieB
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
133357242
NCBI-ProteinID:
XP_061431061
LinkDB
All DBs
Position
7:7859856..7964428
Genome browser
AA seq
1979 aa
AA seq
DB search
MAPQAAKSPFGGAAPPGPHSFKKFTPEVLEEIERRIAEEKQRAAKVGSDGGTEEEDDDKK
PKPKSDLEAGKGLPMIYGDIPPEMVGTPLVDLDPFYSSQKTFIVVNKGKAIFRFSATPAL
YMISPFNLMRRGAIRVLTHTIFSLFIMVTIITNCVFMTMSDPPDWSKNVEYTFTGIYTFE
SLIKIVARGFVIDNFTFLRDPWNWLDFSVITMAYVTEFVDLGNVSALRTFRVLRALKTIS
VIPGLKTIVGALIQSVKKLSDVVILTVFCLSVFALIGLQLFMGNLRHKCILWPRPNVTFA
YNTTEEPFDWQTYVDDTKNHYVWEVKGKDALLCGNGSDAGQCPEGFTCIKAGRNPNYGYT
SFDSFSWAFLALFRLMTQDFWENLFMQTLRAAGKTYMIFFVVVIFIGSFYLINLILAVVA
MAYDEQNQATLAEAEEKEREFQQMLENLHKHQDDMEQQYAEDQAGLSSSSSSEMSKPSSG
TERVSHKKKRKSCTSGEGIVKTESEESLAETAKSNGKKKGRSRESLIGMYYKPKRARDPS
SDTELADDERSVPGSRRGSAIQRRSNGRGERAVAGAATAAGGGANQHLLLLPEIVVDRAP
TDEADTSSEAGTRRSCRRLSSRSLNLLEEPRLSKRTRSAVTVLTTAMEELEESQKKCPPV
WYKFANTFLIWDCCPLWVKFKNLIKLFVMDPFVDLAITICIILNTLFMAMEHYPISHEFE
EVLMVGNLVFTGIFTAEMVLKLIALDPYDYFQVGWNIFDSIIVSLSLMELGLADVEGLSV
LRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYK
ECVCKINDECVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMV
IGNLVLLNLFLALLLSSFSGLSASDDDNEANSLQIAIARIERGVAFMKGYVRGVFAKCIK
SDGPGADGSDSNGNDAAALEEGKLPDKSDNCVRNHTALEMETLQSNGQGTGDDTKGSPAT
DGERAGLLANAVLPVRVPIAKLEAELERRASSSSSSSTSSSSLSLVDGVKKKRYGHEGSS
SEASTVDLAPNDVVEEALDTEEQEEGPLGCFTDEFVRRHPICDVDVESGRGLVWWTLRRA
CFRIVEHNWFETFIVFMILMSSGALAFEDIYIDQRRMIKTVLEYADKVFSYIFVMEMLLK
WVAYGFHTYFTNAWCWLDFLIVDVSLVSLAATAMGYSELGAIKSLRTLRALRPLRALSRF
EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCMNTTDGSRFLPEVV
NNYSDCMVLKQSTQEARWLNVKVNYDNVGFGYLALLQVATFKGWMDIMYAAVDSRGVTEQ
PIYETNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGEDIFMTEEQKKFHSA
MKKLGSKKPVKPIPRPSNIVQGWVYDLVAKQAFDIIIMVLICLNMVTMMVEVDDQSQLMS
DVLYYVNLIFIVVFTGECLLKLFSLRHYYFTVGWNIFDFVVVILSIVGILLADIIEKYFV
SPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFAMS
NFAYVRRESGIDDMFNFETFGNSMICLFMITTSAGWDGLLNPILNSPPDCDLDQEHPGTS
VRGDCGNSPVGIAFFTSYIIISFLVVVNMYIAIILENFNVATEESTEPLSEDDFETFYEV
WERFDPDVTQFMEWERLSDFADALDDPLRVAKPNKIRLYNMDLPMVIGDRIHCLDILFAF
TKRVLGEGAGMDALKQQMEDRFMAANPSKISYEPITTTLRRRQEELAARVIQRAYRRHRM
RVSLKKIHDGDVKPGAGDGADAGPKDAATVEVPEPETAAAVAATRPEAEVVAPEAASPDA
SATLGSTPLPGESPATPDDVVYDKEAERQEEGDKGGVATARLKPENKDFEGKNIRESVV
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggccccacaagctgcaaagagccctttcggtggcgcggcaccacctggaccgcacagc
ttcaagaagttcactccggaggtgctggaggagatcgagaggaggatcgccgaggagaag
cagcgagccgcgaaggtcggcagcgacgggggcaccgaagaggaggacgacgacaagaag
ccgaagcccaagagcgacctggaggccggcaagggcctgcccatgatctacggcgacatc
ccgccggaaatggtcggcacccccctcgtggacctggacccgttctacagctcgcagaag
acgttcatcgttgtcaacaaaggcaaggcaatcttccgattcagcgccaccccggcgctc
tacatgatcagccccttcaacttaatgaggcgaggtgccatcagggtccttacccacacg
atattcagcctgttcatcatggtcaccatcatcaccaactgcgtcttcatgacgatgagc
gatccacccgattggtccaagaacgtcgagtacaccttcacggggatctacacgttcgag
tcgctcatcaagatcgtcgcgagaggattcgtcatcgacaacttcaccttcctccgggac
ccctggaattggctggacttcagcgtcatcactatggcgtacgtgacggagttcgtggac
ctggggaacgtctcggctctgagaaccttccgggttttgcgagctctcaagaccatctcc
gttatcccgggcctcaagaccatagtgggggcactgatccagtcggtgaagaagctgtcg
gacgtggtgatcctcaccgtcttctgcctcagcgtgttcgccctcatcggcctgcagctc
ttcatgggcaacctgcggcacaagtgcatcctctggccgcggccaaacgtcacgttcgcg
tacaacacgacggaggagcccttcgactggcagacctacgtcgacgatacgaaaaaccat
tacgtctgggaagtcaaggggaaagacgcgcttctctgcggcaatggctcggacgccggc
caatgccccgagggcttcacgtgcatcaaggccgggcgcaaccccaattatggctacacg
agcttcgactccttcagctgggccttcctcgcgctcttccgcctcatgacgcaggacttc
tgggagaacctcttcatgcagacactgagggccgccggaaagacctacatgatcttcttc
gtggtggttatcttcattggatccttctacctcatcaacctcattctggccgtggtggcc
atggcgtacgacgagcagaaccaggccacgctggccgaggccgaggagaaggagcgggag
ttccagcagatgctagagaacctccacaagcaccaggatgacatggagcagcagtacgcc
gaggaccaagctggcctgagctcctcctcgtcctcggagatgtcaaagccgagcagcggc
acggagcgcgtaagccacaagaagaagcgaaagtcatgcaccagcggagagggcattgtc
aagaccgagtcggaggagagcctcgccgagaccgccaagagcaacggcaagaagaagggg
cgctcacgagagtcgctcatcggcatgtactacaagcccaagcgggcgcgcgacccgagc
tccgacacggagctcgccgacgacgagaggagcgtgcccgggagccggcgcggctcggcc
atccagcgccgcagcaacggccgcggggagcgggccgtggcgggggccgcgacggccgcc
ggcggcggcgccaaccagcacctgctgctgctgcccgagattgtggtggacagagcgccg
accgatgaagcggacacgagcagcgaggccggcacgcggcgcagctgcaggaggctcagc
agccgctcgctcaacctcctggaagagccgcggttgagcaagcgcacgcgcagcgccgtc
accgtgctcaccaccgccatggaggagttggaggaatcgcagaagaagtgcccccctgtc
tggtacaagttcgccaacaccttcctcatctgggactgctgcccgctgtgggtcaagttc
aagaacctgataaagttgttcgtcatggacccgttcgtcgacctggccatcaccatctgc
atcatcctcaacacgctcttcatggccatggagcactaccccatttcacacgaatttgaa
gaggtcctgatggtcggcaatctggtgttcactgggatattcacggcagagatggtgctc
aagctcatcgcactcgacccctacgactacttccaggtgggctggaacatcttcgacagc
atcatcgtgagcctgagcctcatggagctgggactcgcagacgtggagggcctctccgtg
ctgcgctccttcaggctgatgcgagtgttcaagctggccaagtcatggccgacgctcaac
atgctcatcaagatcatcggcaactctgtgggcgccctgggcaacctgacgctggtgctc
gccatcattgtcttcatcttcgccgtcgtcggcatgcagctcttcggcaagaactacaag
gagtgcgtgtgcaagatcaacgacgagtgtgtgctgccgcgctggcacatgcacgacttc
ttccactcgttcctcatcgtgttccgcgtgctctgcggcgagtggatcgagaccatgtgg
gactgcatggaggtggcgggccagaccatgtgcctcatcgtcttcatgatggtcatggtc
atcggcaaccttgtgctcctcaacctcttcctggccctgctgctcagctcgttcagcggc
ctatcggccagcgacgacgacaacgaagccaacagcctgcagatcgccatcgcgcgcatc
gagcgtggtgtcgcgttcatgaagggctacgtgcggggagttttcgccaagtgcatcaag
agcgacggccccggcgccgacggcagcgacagcaacggcaatgacgccgccgctctcgaa
gaggggaaactgccggacaagtccgacaactgcgtccggaaccacacggcgctcgagatg
gagaccctgcagagtaacgggcagggaaccggcgacgataccaaggggtcgcctgccacg
gacggggagcgagcggggctcctggcgaatgccgtccttccggtgcgagtgccgatagcc
aagctggaggccgagttggagcgccgagcttcgagcagctcgtcctcgtcgacctcctcg
tcgtcgttgtcgctagtggatggcgtgaagaagaagagatacggtcacgagggcagctcg
tcggaggcaagtaccgtggacctggctcccaatgacgtggtcgaggaggcgctggatacc
gaggagcaggaggaggggcccctcggctgcttcaccgatgagtttgtgcgtcgccacccg
atctgcgacgtggacgtggagagcggacgcggcctcgtctggtggacgctgcgccgcgcc
tgcttccgcatcgtcgagcacaactggttcgagacgttcatcgtcttcatgatcctgatg
agcagcggcgcgctggcgttcgaagacatctacatcgaccagcgcaggatgatcaagacg
gtgctggaatacgccgacaaggtgttctcctacatcttcgtgatggagatgctgctcaag
tgggtggcctacggcttccacacgtacttcaccaacgcgtggtgctggctcgacttcctc
atcgtggacgtgtccctggtgagcctcgcggcaaccgccatgggctactcggagctcgga
gccatcaagtccctgcgtacgctcagggccctgcgacctctccgtgctctgtctcgcttt
gaaggcatgcgggtggtggtgaacgcgctggtgggagccatcccgtccatcatgaacgtg
ctgctcgtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgcg
gggaagtactactactgcatgaacacgacggacggcagccgcttcctgcccgaggtggtc
aacaactattccgattgtatggtgctcaaacagagcactcaggaggcgcgctggctcaac
gtcaaggtcaactacgacaacgttggcttcggctacctggccctcctccaagtcgcgacg
ttcaagggctggatggacatcatgtacgcggccgtcgactcacgtggagttaccgagcag
cccatctacgagacgaacatctacatgtacctgtacttcgtcatcttcatcatcttcggc
tccttcttcacgctcaacctcttcatcggcgtcatcatcgacaatttcaaccagcagaag
aaaaagtttggtggtgaggatatcttcatgacggaggagcagaagaagttccacagcgcc
atgaagaagctcggctccaagaagccggtgaagccgataccgcggccgtcgaacatcgtc
cagggctgggtgtacgacctggtggccaagcaggccttcgacatcatcatcatggtcctc
atctgcctcaacatggtgacgatgatggtggaggtcgacgatcagagccagttgatgagc
gacgttctctactacgtcaacctcatcttcatcgtcgtcttcaccggcgagtgcctcctg
aagctcttctcgctccgccactactacttcaccgtcgggtggaacattttcgacttcgtg
gtggtcatcctgtccatcgtgggcatcctgctggcggacatcatcgagaagtacttcgtg
tccccaacgttgttccgcgtgatccgcctcgcccgaatcgggcgagtgctccgcctgatc
cgcggcgccaagggcatccgcacgctgctcttcgcgctcatgatgtcgctgccggcgctt
ttcaacatcggcctgctgctcttcctcgtcatgttcatcttctccatcttcgccatgtcc
aacttcgcctacgtgcggcgggagagcggcatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgatctgcctcttcatgatcaccacgtcggccggctgggacggcctcctg
aaccccatcctcaacagcccgcccgactgcgacctcgatcaggagcacccgggcacgtcg
gtgaggggcgactgcggcaactcgccggtgggaatcgccttcttcaccagctacatcatc
atctccttcctggtggtcgtcaacatgtacatcgccatcatcctcgagaacttcaacgtg
gccacggaggagagcaccgagccgctgagcgaggacgacttcgagacgttctacgaggtg
tgggagcgcttcgacccggacgtcacgcagttcatggagtgggagcgcctgtcggacttt
gccgacgccctggacgacccgctgcgcgtcgccaagcccaacaagatccgcctctacaac
atggacctgcccatggtgataggcgaccgcatccactgcctggacatcctcttcgcgttc
accaagcgcgtgttgggcgagggcgccggcatggacgcgctcaagcagcagatggaggac
cgcttcatggcggcaaacccctccaagatctcctacgagcccatcaccacgacgctgcgg
cgccggcaggaggagctggcggcgcgcgtcatccagcgcgcgtaccggcgccaccgcatg
cgcgtgtcgctcaagaagattcacgacggcgacgtcaagcccggagcgggcgacggggcg
gacgccgggccgaaagacgccgccacggtggaggtaccggagccggagacggcggccgcg
gtggcggcgactcggccagaagcggaggtcgtcgctcccgaagcggcgtcgccggacgcg
tcggcgacgttgggatctacgccgctgcccggcgagtctcccgcgacgccggacgacgtc
gtctatgacaaggaagcggaacgtcaagaagaaggcgacaaaggcggcgtcgccacggcg
cggctcaagccagaaaacaaggacttcgagggcaagaacatacgggaatccgtcgtctag
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