Lacticaseibacillus rhamnosus Lc 705: LC705_00140
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Entry
LC705_00140 CDS
T00990
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl00230
Purine metabolism
lrl00240
Pyrimidine metabolism
lrl01100
Metabolic pathways
lrl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LC705_00140 (nrdD)
00240 Pyrimidine metabolism
LC705_00140 (nrdD)
Enzymes [BR:
lrl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
LC705_00140 (nrdD)
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Gene cluster
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
CAR88979
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Position
154742..156925
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AA seq
727 aa
AA seq
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MIEFYTQIKKRDGRIVDFDATKISTAITKAAESVAKLSPRDVLTIDHLTDTVTAKIRDRY
HDDVEIAEIQTVVEQTLIAAEKYDWAEAYTQYRLKRDLARKQKQDVNYNVARLVNRDKSV
VNENANKDSRVFSTQRDLTAGAVAKAIGLKMLPPAVANAHLRGDIHWHDLDYTPFMAETN
CCLIDFDYMLNHGFSIGNAEVEPAHSIQVAVTQMTQIIANVASSQYGGCSSDRTDQVLAP
FAEKNYQKHLREFGDVIDDPTTLKALAVKQTKKDIYDALQTLEYQVNTLYSTQGQTPFVT
VGFGLGTSWIEREIQKDILKIRILGLGKERRTAIFPKLVFTLKRGLNLNSEDPNYDIKQL
AIECATKRMYPDVVSYDTIKRLTGSFKAPMGCRSFLQGWTDPKTGKEVNAGRMNLGVITV
NLPRIAMESKGDKDKFWKIFEERMRICKEGLLYKIERTKQATPESAPILYKYGAFGHRLA
DTDSIDDLFKNGRATVSLGYIGLYEVGTVFYGSAWEKNPDAKAFSVSIVKALDDHCKAWE
KQYGYHFSVYGTPSESLTDTFCREDTKKFGIVKDITDKEYYTNSFHYDVRKSPTPFEKLD
FEKDYPQYSAGGFIHYCEYPNLKQNPKALEAVWDYAYDKIGYLGTNTPIDQCFKCGFKGE
FTATAKGYECPECGNHDPATCDVVKRLCGYLGNPNKRPMVHGRQEEIIHRKKHITFSLNQ
VANRRDK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattttatacacaaatcaagaaacgggatgggcggatcgttgattttgatgcg
accaagatcagcaccgcgataaccaaagcggcagaaagtgtggcgaaactgtcaccgcgc
gatgtgttaaccattgaccacttgacggatacggttacggctaagattcgcgatcggtat
catgatgatgttgagattgccgaaattcaaacggttgtcgagcagacactcattgccgcc
gaaaagtacgactgggcagaagcctacacgcaatatcggctgaagcgtgatttagcgcgc
aaacagaagcaagacgttaattacaatgttgcgcgactggtcaatcgcgataagagcgtc
gtcaacgagaatgctaacaaggatagtcgggtgttctcgacccaacgtgatttgacagcc
ggtgcggtggctaaagcgattggcttgaaaatgttgccgccagccgttgccaatgcgcat
ttgcgtggcgacattcattggcatgatcttgactataccccgttcatggcggaaaccaac
tgttgcctgattgattttgactatatgttgaatcacggcttctccattgggaacgccgag
gttgagccggcccactcgattcaggtggcggtgacccagatgacacaaatcattgccaac
gtggcctccagtcaatatggtggctgttccagtgaccggacagatcaggtgctagcgccg
tttgccgagaaaaattaccagaagcatttgcgtgaattcggcgatgtgattgatgatccc
accaccctcaaagcgttggcagtgaagcagactaagaaggatatttatgatgccttgcaa
acgctggaatatcaggttaacaccctttattcaacgcaaggacagaccccgtttgtgacc
gtgggctttggtcttggcactagctggattgaacgtgaaattcaaaaggatattttgaaa
atccgaattctgggtctgggcaaggaacgccggacagcgattttcccgaaacttgtcttc
acgttaaaacgcggcttgaaccttaattcggaagacccgaactacgacatcaaacagttg
gcgattgagtgcgccaccaagcggatgtatcctgatgtggtttcctatgacacaatcaag
cggctgactggctctttcaaagcgccgatgggttgtcgcagtttcctgcaaggctggact
gatccgaaaacaggtaaggaagtcaatgccgggcgcatgaatctcggcgttattacggtt
aacctaccgcggattgctatggagtccaaaggcgataaagataagttttggaagattttt
gaagaacggatgcgcatctgcaaggaaggtttgctttacaagattgaacgaaccaaacaa
gccacgccggaaagtgccccgattctttacaagtatggtgcatttggccaccgcttagcc
gataccgatagcattgacgatcttttcaaaaatggtcgcgccaccgtatcacttggctac
atcggtctgtatgaggtcggaacggttttctatggctccgcatgggagaagaatcctgat
gccaaggccttttccgtttcgattgtgaaggcgctggatgatcattgcaaggcctgggag
aaacaatacggctatcacttctcggtttacggcactccaagcgaatcactgactgacacc
ttctgccgcgaagacactaagaagttcggcatcgtcaaggacatcaccgacaaggaatac
tacaccaacagtttccactatgacgtccgcaagtcacccacaccatttgaaaagctcgac
tttgaaaaggactatccgcaatacagtgccggtggcttcatccactattgcgaatacccg
aacctgaagcaaaatcctaaggcactggaagcggtgtgggactatgcatacgataaaatc
ggttatcttggcaccaacaccccgattgatcaatgcttcaaatgcggttttaaaggcgag
ttcacagcgacagccaagggatatgaatgcccggaatgcggcaaccacgacccggctacc
tgcgatgtcgtcaagcggctctgcggttaccttggaaatcccaacaagcggccaatggtc
cacggacggcaggaagaaatcatccaccgcaagaaacatattacgttcagcctgaatcag
gtggccaatcgccgcgataagtag
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