Lacticaseibacillus rhamnosus Lc 705: LC705_01637
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Entry
LC705_01637 CDS
T00990
Symbol
oppD
Name
(GenBank) ABC transporter, oligopeptide transporter ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC705_01637 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrl02000
]
LC705_01637 (oppD)
Transporters [BR:
lrl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LC705_01637 (oppD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
nSTAND3
RsgA_GTPase
AAA_16
NB-ARC
nSTAND1
DUF87
AAA_23
NACHT
Sigma54_activat
MobB
GTP_EFTU_D2
AAA_33
ATPase_2
NTPase_1
AAA_25
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CAR90476
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All DBs
Position
complement(1657475..1658497)
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AA seq
340 aa
AA seq
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MDKPEDLLLDVQHLHTGFRLGDAFYDAVDDVSITLRKDEILAIVGESGSGKSTLATSIIG
LHDPRNTKVTGDILYNNLNLVGLNETLFDRIRGKDIGMIFQDPLAALNPLMRIGEQIEET
LVYHTKMNKEQREQRVLELLSQVGIPNPERTARSYPHELAGGMRQRIVIAIAIACKPPII
IADEPTTALDVTIQAQILDLLEDIQREMHSGIILITHDLGVVAETADRVAVMYAGQIVES
GSVMDVFKHPTHPYTRSLLRSMPQADSDDDELHVIQGVVPSLKNMQMEGCRFAPRIPWIP
ESAHEEHPTMHEVAPDHFVQCTCYKDFYFPDDKQAAGKGE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacctgaagacttattattggatgtgcaacatttgcacaccggattcagactt
ggagatgctttttacgatgctgtcgatgatgtcagcatcacgttacgaaaagatgagatt
ttggcgatcgtaggtgagtcgggttctggtaagagtaccttggcaaccagtatcattggc
ctgcatgatccacgtaacacaaaggtcactggtgatattttgtacaataacctaaaccta
gttggcttaaacgaaacgctttttgatcgaattcgtggtaaagatattggcatgattttc
caggatcccttggctgctttgaacccattgatgcgtattggcgagcagattgaagagacg
cttgtctaccacaccaagatgaacaaggaacaacgcgaacaacgggttttggaattgctg
agtcaagtcggcattcctaatccggagcggacagcacgctcctatccgcatgaactggcc
ggcgggatgcgtcagcggattgtcattgcaattgcgattgcctgcaagccgccgattatc
attgctgatgaaccaaccaccgcattggacgtgacgattcaggctcaaattcttgatctg
cttgaagatattcagcgggaaatgcattcaggcattattttaattacccatgatttaggt
gtggtggcagaaacggctgatcgagttgccgtgatgtatgccgggcagattgtcgaaagc
ggctcggtgatggatgttttcaagcacccgactcacccgtatacgcgcagtcttttgcgc
tccatgcctcaagcggattctgatgatgacgaattgcacgtgatccaaggcgtggtgccg
tcactgaagaatatgcagatggaaggatgccgctttgctcctcgaattccatggattccg
gaatcggcacacgaagaacatccgaccatgcatgaagtcgcaccggatcattttgttcag
tgtacttgctacaaggacttctatttcccggatgacaaacaagcggctggaaaaggtgag
taa
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